Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.63■□□□□ 0.73
SLIRPQ9GZT3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLIRPQ9GZT3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLIRPQ9GZT3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.63■□□□□ 0.73
SLIRPQ9GZT3 LINC01971-201ENST00000617888 1048 ntBASIC19.63■□□□□ 0.73
SLIRPQ9GZT3 AC007952.6-201ENST00000573168 2673 ntBASIC19.63■□□□□ 0.73
SLIRPQ9GZT3 AC003957.1-201ENST00000625108 2673 ntBASIC19.63■□□□□ 0.73
SLIRPQ9GZT3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLIRPQ9GZT3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLIRPQ9GZT3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.63■□□□□ 0.73
SLIRPQ9GZT3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.63■□□□□ 0.73
SLIRPQ9GZT3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.62■□□□□ 0.73
SLIRPQ9GZT3 PKD1P6-201ENST00000343738 4769 ntBASIC19.62■□□□□ 0.73
SLIRPQ9GZT3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLIRPQ9GZT3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.62■□□□□ 0.73
SLIRPQ9GZT3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLIRPQ9GZT3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SLIRPQ9GZT3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLIRPQ9GZT3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLIRPQ9GZT3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLIRPQ9GZT3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
SLIRPQ9GZT3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLIRPQ9GZT3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLIRPQ9GZT3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLIRPQ9GZT3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLIRPQ9GZT3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLIRPQ9GZT3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.61■□□□□ 0.73
SLIRPQ9GZT3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLIRPQ9GZT3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SLIRPQ9GZT3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLIRPQ9GZT3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLIRPQ9GZT3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLIRPQ9GZT3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLIRPQ9GZT3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLIRPQ9GZT3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLIRPQ9GZT3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SLIRPQ9GZT3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLIRPQ9GZT3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLIRPQ9GZT3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLIRPQ9GZT3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLIRPQ9GZT3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLIRPQ9GZT3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLIRPQ9GZT3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLIRPQ9GZT3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLIRPQ9GZT3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.6■□□□□ 0.73
SLIRPQ9GZT3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLIRPQ9GZT3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.6■□□□□ 0.73
SLIRPQ9GZT3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLIRPQ9GZT3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLIRPQ9GZT3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
SLIRPQ9GZT3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.59■□□□□ 0.73
SLIRPQ9GZT3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLIRPQ9GZT3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLIRPQ9GZT3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
SLIRPQ9GZT3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SLIRPQ9GZT3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLIRPQ9GZT3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
SLIRPQ9GZT3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLIRPQ9GZT3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLIRPQ9GZT3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SLIRPQ9GZT3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLIRPQ9GZT3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SLIRPQ9GZT3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.58■□□□□ 0.72
SLIRPQ9GZT3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLIRPQ9GZT3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLIRPQ9GZT3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 ALDH1A3-203ENST00000557963 1670 ntBASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 AL157400.5-201ENST00000507624 621 ntBASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLIRPQ9GZT3 AC244015.2-201ENST00000616358 1861 ntBASIC19.56■□□□□ 0.72
SLIRPQ9GZT3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLIRPQ9GZT3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLIRPQ9GZT3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.56■□□□□ 0.72
SLIRPQ9GZT3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLIRPQ9GZT3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SLIRPQ9GZT3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.56■□□□□ 0.72
SLIRPQ9GZT3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLIRPQ9GZT3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.56■□□□□ 0.72
SLIRPQ9GZT3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.56■□□□□ 0.72
SLIRPQ9GZT3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLIRPQ9GZT3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLIRPQ9GZT3 AL391422.3-201ENST00000603791 2761 ntBASIC19.55■□□□□ 0.72
SLIRPQ9GZT3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLIRPQ9GZT3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms