Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC5.99□□□□□ -1.45
LCE3DQ9BYE3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 DUX4L13-201ENST00000554103 1267 ntBASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 DUX4L15-201ENST00000611059 1267 ntBASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 DUX4L23-201ENST00000615195 1269 ntBASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 DUX4L24-201ENST00000617576 1269 ntBASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 DUX4L22-201ENST00000618238 1269 ntBASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 DUX4L20-201ENST00000619712 1269 ntBASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 DUX4L21-201ENST00000622058 1269 ntBASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 DUX4L10-201ENST00000622460 1267 ntBASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 DUX4L25-201ENST00000624915 1269 ntBASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 AL161729.1-201ENST00000604104 1402 ntBASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LCE3DQ9BYE3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LCE3DQ9BYE3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LCE3DQ9BYE3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LCE3DQ9BYE3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LCE3DQ9BYE3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LCE3DQ9BYE3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC5.97□□□□□ -1.45
LCE3DQ9BYE3 AC092053.2-201ENST00000640557 1818 ntBASIC5.97□□□□□ -1.45
LCE3DQ9BYE3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LCE3DQ9BYE3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LCE3DQ9BYE3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms