Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
THUMPD3Q9BV44 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
THUMPD3Q9BV44 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
THUMPD3Q9BV44 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
THUMPD3Q9BV44 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
THUMPD3Q9BV44 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
THUMPD3Q9BV44 KRT18P24-201ENST00000344739 1156 ntBASIC21.18■□□□□ 0.98
THUMPD3Q9BV44 THA1P-201ENST00000590384 1145 ntBASIC21.18■□□□□ 0.98
THUMPD3Q9BV44 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
THUMPD3Q9BV44 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
THUMPD3Q9BV44 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
THUMPD3Q9BV44 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.18■□□□□ 0.98
THUMPD3Q9BV44 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
THUMPD3Q9BV44 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
THUMPD3Q9BV44 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
THUMPD3Q9BV44 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD3Q9BV44 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD3Q9BV44 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.17■□□□□ 0.98
THUMPD3Q9BV44 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD3Q9BV44 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD3Q9BV44 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD3Q9BV44 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD3Q9BV44 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
THUMPD3Q9BV44 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
THUMPD3Q9BV44 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.16■□□□□ 0.98
THUMPD3Q9BV44 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
THUMPD3Q9BV44 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
THUMPD3Q9BV44 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
THUMPD3Q9BV44 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
THUMPD3Q9BV44 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
THUMPD3Q9BV44 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
THUMPD3Q9BV44 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.15■□□□□ 0.98
THUMPD3Q9BV44 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
THUMPD3Q9BV44 AL353803.4-201ENST00000565882 1934 ntBASIC21.14■□□□□ 0.98
THUMPD3Q9BV44 AC137767.1-201ENST00000602918 1920 ntBASIC21.14■□□□□ 0.98
THUMPD3Q9BV44 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD3Q9BV44 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD3Q9BV44 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD3Q9BV44 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.14■□□□□ 0.97
THUMPD3Q9BV44 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD3Q9BV44 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD3Q9BV44 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD3Q9BV44 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD3Q9BV44 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
THUMPD3Q9BV44 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD3Q9BV44 AF131216.4-201ENST00000638924 1588 ntBASIC21.14■□□□□ 0.97
THUMPD3Q9BV44 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD3Q9BV44 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 AC103724.3-201ENST00000564481 992 ntBASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD3Q9BV44 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
THUMPD3Q9BV44 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.12■□□□□ 0.97
THUMPD3Q9BV44 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
THUMPD3Q9BV44 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
THUMPD3Q9BV44 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.12■□□□□ 0.97
THUMPD3Q9BV44 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
THUMPD3Q9BV44 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THUMPD3Q9BV44 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
THUMPD3Q9BV44 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
THUMPD3Q9BV44 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
THUMPD3Q9BV44 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THUMPD3Q9BV44 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THUMPD3Q9BV44 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THUMPD3Q9BV44 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
THUMPD3Q9BV44 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THUMPD3Q9BV44 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THUMPD3Q9BV44 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THUMPD3Q9BV44 AC004448.1-201ENST00000458332 883 ntBASIC21.11■□□□□ 0.97
THUMPD3Q9BV44 MIR4281-201ENST00000580852 62 ntBASIC21.11■□□□□ 0.97
THUMPD3Q9BV44 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
THUMPD3Q9BV44 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.11■□□□□ 0.97
THUMPD3Q9BV44 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms