Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RNF2Q99496 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RNF2Q99496 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF2Q99496 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF2Q99496 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
RNF2Q99496 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RNF2Q99496 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF2Q99496 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF2Q99496 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNF2Q99496 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF2Q99496 AC242852.2-201ENST00000615738 1807 ntBASIC17.59■□□□□ 0.41
RNF2Q99496 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
RNF2Q99496 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF2Q99496 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF2Q99496 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF2Q99496 AC103724.3-201ENST00000564481 992 ntBASIC17.59■□□□□ 0.41
RNF2Q99496 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF2Q99496 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF2Q99496 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF2Q99496 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF2Q99496 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF2Q99496 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF2Q99496 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RNF2Q99496 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF2Q99496 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF2Q99496 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RNF2Q99496 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF2Q99496 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF2Q99496 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF2Q99496 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF2Q99496 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF2Q99496 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RNF2Q99496 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF2Q99496 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF2Q99496 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF2Q99496 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF2Q99496 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF2Q99496 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF2Q99496 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF2Q99496 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF2Q99496 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF2Q99496 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF2Q99496 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF2Q99496 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF2Q99496 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RNF2Q99496 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF2Q99496 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RNF2Q99496 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF2Q99496 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF2Q99496 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF2Q99496 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.56■□□□□ 0.4
RNF2Q99496 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF2Q99496 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF2Q99496 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF2Q99496 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF2Q99496 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF2Q99496 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF2Q99496 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF2Q99496 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF2Q99496 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF2Q99496 ALDH1A3-203ENST00000557963 1670 ntBASIC17.55■□□□□ 0.4
RNF2Q99496 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF2Q99496 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF2Q99496 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF2Q99496 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
RNF2Q99496 RARRES2P1-201ENST00000474487 481 ntBASIC17.55■□□□□ 0.4
RNF2Q99496 MIR4281-201ENST00000580852 62 ntBASIC17.55■□□□□ 0.4
RNF2Q99496 AL031848.2-201ENST00000607670 837 ntBASIC17.55■□□□□ 0.4
RNF2Q99496 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF2Q99496 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF2Q99496 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF2Q99496 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF2Q99496 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF2Q99496 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF2Q99496 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF2Q99496 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF2Q99496 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
RNF2Q99496 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF2Q99496 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF2Q99496 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF2Q99496 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF2Q99496 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF2Q99496 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF2Q99496 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF2Q99496 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
RNF2Q99496 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF2Q99496 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF2Q99496 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF2Q99496 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF2Q99496 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms