Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 GUSBP5-202ENST00000510805 1989 ntBASIC23.64■■□□□ 1.38
PCDHB18PQ96TA0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHB18PQ96TA0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHB18PQ96TA0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB18PQ96TA0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
PCDHB18PQ96TA0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB18PQ96TA0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.37
PCDHB18PQ96TA0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB18PQ96TA0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 GUSBP5-201ENST00000418136 578 ntBASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 DUX4L4-201ENST00000566884 1269 ntBASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 MIR6724-1-201ENST00000616420 92 ntBASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 MIR6724-2-201ENST00000616483 92 ntBASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 MIR6724-4-201ENST00000617390 92 ntBASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 MIR6724-3-201ENST00000622482 92 ntBASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB18PQ96TA0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB18PQ96TA0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB18PQ96TA0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.62■■□□□ 1.37
PCDHB18PQ96TA0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB18PQ96TA0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB18PQ96TA0 C17orf82-201ENST00000623772 1530 ntBASIC23.62■■□□□ 1.37
PCDHB18PQ96TA0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB18PQ96TA0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB18PQ96TA0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHB18PQ96TA0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB18PQ96TA0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB18PQ96TA0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHB18PQ96TA0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB18PQ96TA0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB18PQ96TA0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PCDHB18PQ96TA0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB18PQ96TA0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB18PQ96TA0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB18PQ96TA0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
PCDHB18PQ96TA0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB18PQ96TA0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB18PQ96TA0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB18PQ96TA0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB18PQ96TA0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDHB18PQ96TA0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB18PQ96TA0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB18PQ96TA0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB18PQ96TA0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB18PQ96TA0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PCDHB18PQ96TA0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB18PQ96TA0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.59■■□□□ 1.37
PCDHB18PQ96TA0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB18PQ96TA0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.59■■□□□ 1.37
PCDHB18PQ96TA0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.59■■□□□ 1.37
PCDHB18PQ96TA0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDHB18PQ96TA0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHB18PQ96TA0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
PCDHB18PQ96TA0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB18PQ96TA0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB18PQ96TA0 ESRRAP2-201ENST00000418437 1549 ntBASIC23.59■■□□□ 1.37
PCDHB18PQ96TA0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHB18PQ96TA0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB18PQ96TA0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB18PQ96TA0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHB18PQ96TA0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHB18PQ96TA0 KRT16P3-201ENST00000439127 1283 ntBASIC23.58■■□□□ 1.37
PCDHB18PQ96TA0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.37
PCDHB18PQ96TA0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB18PQ96TA0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
PCDHB18PQ96TA0 AC087742.1-201ENST00000575880 1738 ntBASIC23.58■■□□□ 1.37
PCDHB18PQ96TA0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHB18PQ96TA0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHB18PQ96TA0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHB18PQ96TA0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHB18PQ96TA0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.57■■□□□ 1.36
PCDHB18PQ96TA0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PCDHB18PQ96TA0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHB18PQ96TA0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHB18PQ96TA0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
PCDHB18PQ96TA0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms