Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 AC105233.4-201ENST00000642045 216 ntBASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3BQ96NU0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP3BQ96NU0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP3BQ96NU0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP3BQ96NU0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP3BQ96NU0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.31■■□□□ 1
CNTNAP3BQ96NU0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.31■■□□□ 1
CNTNAP3BQ96NU0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP3BQ96NU0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.31■■□□□ 1
CNTNAP3BQ96NU0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.31■■□□□ 1
CNTNAP3BQ96NU0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.31■■□□□ 1
CNTNAP3BQ96NU0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP3BQ96NU0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.3■■□□□ 1
CNTNAP3BQ96NU0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.3■■□□□ 1
CNTNAP3BQ96NU0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP3BQ96NU0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.3■■□□□ 1
CNTNAP3BQ96NU0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.3■■□□□ 1
CNTNAP3BQ96NU0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP3BQ96NU0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP3BQ96NU0 SLC7A5P1-201ENST00000568957 537 ntBASIC21.3■■□□□ 1
CNTNAP3BQ96NU0 AC005181.1-201ENST00000604782 1256 ntBASIC21.3■■□□□ 1
CNTNAP3BQ96NU0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP3BQ96NU0 AC131274.2-201ENST00000580697 1507 ntBASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 AC092118.2-201ENST00000613495 667 ntBASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.29■■□□□ 1
CNTNAP3BQ96NU0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 AC142381.4-202ENST00000563973 229 ntBASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 MFSD11-216ENST00000590393 1141 ntBASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP3BQ96NU0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.27■■□□□ 1
CNTNAP3BQ96NU0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP3BQ96NU0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CNTNAP3BQ96NU0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.27■■□□□ 1
CNTNAP3BQ96NU0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP3BQ96NU0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP3BQ96NU0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP3BQ96NU0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP3BQ96NU0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.27■□□□□ 0.99
CNTNAP3BQ96NU0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CNTNAP3BQ96NU0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CNTNAP3BQ96NU0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.26■□□□□ 0.99
CNTNAP3BQ96NU0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP3BQ96NU0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP3BQ96NU0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.26■□□□□ 0.99
CNTNAP3BQ96NU0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.26■□□□□ 0.99
CNTNAP3BQ96NU0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP3BQ96NU0 KRT18P21-201ENST00000515767 1272 ntBASIC21.26■□□□□ 0.99
CNTNAP3BQ96NU0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.26■□□□□ 0.99
CNTNAP3BQ96NU0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
CNTNAP3BQ96NU0 AC231657.2-201ENST00000624556 255 ntBASIC21.26■□□□□ 0.99
CNTNAP3BQ96NU0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP3BQ96NU0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP3BQ96NU0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP3BQ96NU0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.25■□□□□ 0.99
CNTNAP3BQ96NU0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CNTNAP3BQ96NU0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP3BQ96NU0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms