Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CFAP54Q96N23 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CFAP54Q96N23 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.05■■□□□ 1.12
CFAP54Q96N23 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CFAP54Q96N23 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.05■■□□□ 1.12
CFAP54Q96N23 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.05■■□□□ 1.12
CFAP54Q96N23 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CFAP54Q96N23 AC009086.3-201ENST00000623486 1008 ntBASIC22.05■■□□□ 1.12
CFAP54Q96N23 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CFAP54Q96N23 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CFAP54Q96N23 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.05■■□□□ 1.12
CFAP54Q96N23 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CFAP54Q96N23 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.04■■□□□ 1.12
CFAP54Q96N23 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CFAP54Q96N23 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.04■■□□□ 1.12
CFAP54Q96N23 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CFAP54Q96N23 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
CFAP54Q96N23 SLC7A5P1-201ENST00000568957 537 ntBASIC22.04■■□□□ 1.12
CFAP54Q96N23 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CFAP54Q96N23 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CFAP54Q96N23 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.04■■□□□ 1.12
CFAP54Q96N23 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CFAP54Q96N23 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CFAP54Q96N23 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CFAP54Q96N23 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CFAP54Q96N23 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CFAP54Q96N23 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.04■■□□□ 1.12
CFAP54Q96N23 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CFAP54Q96N23 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.04■■□□□ 1.12
CFAP54Q96N23 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CFAP54Q96N23 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.04■■□□□ 1.12
CFAP54Q96N23 AC131274.2-201ENST00000580697 1507 ntBASIC22.04■■□□□ 1.12
CFAP54Q96N23 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CFAP54Q96N23 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.04■■□□□ 1.12
CFAP54Q96N23 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CFAP54Q96N23 RPS2P4-201ENST00000476944 856 ntBASIC22.03■■□□□ 1.12
CFAP54Q96N23 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.03■■□□□ 1.12
CFAP54Q96N23 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CFAP54Q96N23 AL121832.2-201ENST00000610979 668 ntBASIC22.03■■□□□ 1.12
CFAP54Q96N23 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CFAP54Q96N23 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CFAP54Q96N23 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.03■■□□□ 1.12
CFAP54Q96N23 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP54Q96N23 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CFAP54Q96N23 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.02■■□□□ 1.12
CFAP54Q96N23 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP54Q96N23 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP54Q96N23 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.02■■□□□ 1.12
CFAP54Q96N23 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP54Q96N23 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.02■■□□□ 1.12
CFAP54Q96N23 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP54Q96N23 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP54Q96N23 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.01■■□□□ 1.11
CFAP54Q96N23 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP54Q96N23 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CFAP54Q96N23 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.01■■□□□ 1.11
CFAP54Q96N23 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP54Q96N23 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
CFAP54Q96N23 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.01■■□□□ 1.11
CFAP54Q96N23 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.01■■□□□ 1.11
CFAP54Q96N23 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.01■■□□□ 1.11
CFAP54Q96N23 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP54Q96N23 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP54Q96N23 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP54Q96N23 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP54Q96N23 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP54Q96N23 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
CFAP54Q96N23 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CFAP54Q96N23 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22■■□□□ 1.11
CFAP54Q96N23 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22■■□□□ 1.11
CFAP54Q96N23 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22■■□□□ 1.11
CFAP54Q96N23 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CFAP54Q96N23 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CFAP54Q96N23 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22■■□□□ 1.11
CFAP54Q96N23 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CFAP54Q96N23 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CFAP54Q96N23 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP54Q96N23 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP54Q96N23 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP54Q96N23 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP54Q96N23 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP54Q96N23 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP54Q96N23 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP54Q96N23 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.99■■□□□ 1.11
CFAP54Q96N23 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP54Q96N23 DUX4L4-201ENST00000566884 1269 ntBASIC21.99■■□□□ 1.11
CFAP54Q96N23 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP54Q96N23 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP54Q96N23 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP54Q96N23 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
CFAP54Q96N23 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.99■■□□□ 1.11
CFAP54Q96N23 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP54Q96N23 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.98■■□□□ 1.11
CFAP54Q96N23 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.98■■□□□ 1.11
CFAP54Q96N23 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CFAP54Q96N23 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP54Q96N23 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.98■■□□□ 1.11
CFAP54Q96N23 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
CFAP54Q96N23 AL158047.1-201ENST00000445918 881 ntBASIC21.98■■□□□ 1.11
CFAP54Q96N23 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms