Protein–RNA interactions for Protein: Q96I51

RCC1L, RCC1-like G exchanging factor-like protein, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1LQ96I51 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCC1LQ96I51 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.06■□□□□ 0.48
RCC1LQ96I51 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.06■□□□□ 0.48
RCC1LQ96I51 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCC1LQ96I51 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCC1LQ96I51 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCC1LQ96I51 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RCC1LQ96I51 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
RCC1LQ96I51 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RCC1LQ96I51 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RCC1LQ96I51 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCC1LQ96I51 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RCC1LQ96I51 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCC1LQ96I51 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCC1LQ96I51 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCC1LQ96I51 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RCC1LQ96I51 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.05■□□□□ 0.48
RCC1LQ96I51 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.05■□□□□ 0.48
RCC1LQ96I51 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.05■□□□□ 0.48
RCC1LQ96I51 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCC1LQ96I51 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCC1LQ96I51 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.05■□□□□ 0.48
RCC1LQ96I51 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCC1LQ96I51 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCC1LQ96I51 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RCC1LQ96I51 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.05■□□□□ 0.48
RCC1LQ96I51 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.04■□□□□ 0.48
RCC1LQ96I51 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCC1LQ96I51 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCC1LQ96I51 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RCC1LQ96I51 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCC1LQ96I51 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RCC1LQ96I51 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.04■□□□□ 0.48
RCC1LQ96I51 MTDHP2-201ENST00000601468 714 ntBASIC18.04■□□□□ 0.48
RCC1LQ96I51 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RCC1LQ96I51 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RCC1LQ96I51 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.04■□□□□ 0.48
RCC1LQ96I51 PKD1P6-201ENST00000343738 4769 ntBASIC18.04■□□□□ 0.48
RCC1LQ96I51 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCC1LQ96I51 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCC1LQ96I51 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCC1LQ96I51 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCC1LQ96I51 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RCC1LQ96I51 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RCC1LQ96I51 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RCC1LQ96I51 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.03■□□□□ 0.48
RCC1LQ96I51 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCC1LQ96I51 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
RCC1LQ96I51 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCC1LQ96I51 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RCC1LQ96I51 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.03■□□□□ 0.48
RCC1LQ96I51 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.03■□□□□ 0.48
RCC1LQ96I51 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.03■□□□□ 0.48
RCC1LQ96I51 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.03■□□□□ 0.48
RCC1LQ96I51 AC010997.5-201ENST00000609182 354 ntBASIC18.03■□□□□ 0.48
RCC1LQ96I51 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCC1LQ96I51 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.03■□□□□ 0.48
RCC1LQ96I51 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCC1LQ96I51 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCC1LQ96I51 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCC1LQ96I51 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCC1LQ96I51 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.02■□□□□ 0.48
RCC1LQ96I51 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RCC1LQ96I51 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RCC1LQ96I51 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCC1LQ96I51 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCC1LQ96I51 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.02■□□□□ 0.48
RCC1LQ96I51 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCC1LQ96I51 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCC1LQ96I51 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCC1LQ96I51 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.02■□□□□ 0.48
RCC1LQ96I51 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RCC1LQ96I51 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCC1LQ96I51 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RCC1LQ96I51 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCC1LQ96I51 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCC1LQ96I51 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RCC1LQ96I51 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.01■□□□□ 0.47
RCC1LQ96I51 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RCC1LQ96I51 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RCC1LQ96I51 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.01■□□□□ 0.47
RCC1LQ96I51 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.01■□□□□ 0.47
RCC1LQ96I51 MIR6724-1-201ENST00000616420 92 ntBASIC18.01■□□□□ 0.47
RCC1LQ96I51 MIR6724-2-201ENST00000616483 92 ntBASIC18.01■□□□□ 0.47
RCC1LQ96I51 MIR6724-4-201ENST00000617390 92 ntBASIC18.01■□□□□ 0.47
RCC1LQ96I51 MIR6724-3-201ENST00000622482 92 ntBASIC18.01■□□□□ 0.47
RCC1LQ96I51 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.01■□□□□ 0.47
RCC1LQ96I51 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RCC1LQ96I51 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCC1LQ96I51 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RCC1LQ96I51 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RCC1LQ96I51 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18■□□□□ 0.47
RCC1LQ96I51 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
RCC1LQ96I51 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RCC1LQ96I51 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18■□□□□ 0.47
RCC1LQ96I51 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
RCC1LQ96I51 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RCC1LQ96I51 MIR935-201ENST00000401179 91 ntBASIC18■□□□□ 0.47
RCC1LQ96I51 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18■□□□□ 0.47
RCC1LQ96I51 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms