Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC46Q96FV0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRC46Q96FV0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC46Q96FV0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.86■□□□□ 0.77
LRRC46Q96FV0 MIR3181-201ENST00000578512 73 ntBASIC19.86■□□□□ 0.77
LRRC46Q96FV0 AC126544.1-201ENST00000580842 1059 ntBASIC19.86■□□□□ 0.77
LRRC46Q96FV0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LRRC46Q96FV0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC46Q96FV0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC46Q96FV0 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.86■□□□□ 0.77
LRRC46Q96FV0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC46Q96FV0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC46Q96FV0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC46Q96FV0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC46Q96FV0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC46Q96FV0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC46Q96FV0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC46Q96FV0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC46Q96FV0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC46Q96FV0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC46Q96FV0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC46Q96FV0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC46Q96FV0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC46Q96FV0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.85■□□□□ 0.77
LRRC46Q96FV0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LRRC46Q96FV0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC46Q96FV0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC46Q96FV0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC46Q96FV0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 AC141586.4-201ENST00000624558 1573 ntBASIC19.84■□□□□ 0.77
LRRC46Q96FV0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 ALDH1A3-203ENST00000557963 1670 ntBASIC19.84■□□□□ 0.77
LRRC46Q96FV0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC46Q96FV0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC46Q96FV0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC46Q96FV0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC46Q96FV0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.83■□□□□ 0.77
LRRC46Q96FV0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LRRC46Q96FV0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.83■□□□□ 0.77
LRRC46Q96FV0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC46Q96FV0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC46Q96FV0 pRNA.6-201ENST00000610482 90 ntBASIC19.83■□□□□ 0.77
LRRC46Q96FV0 pRNA.5-201ENST00000612139 90 ntBASIC19.83■□□□□ 0.77
LRRC46Q96FV0 pRNA.11-201ENST00000618423 90 ntBASIC19.83■□□□□ 0.77
LRRC46Q96FV0 pRNA.13-201ENST00000619112 90 ntBASIC19.83■□□□□ 0.77
LRRC46Q96FV0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
LRRC46Q96FV0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC46Q96FV0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC46Q96FV0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC46Q96FV0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC46Q96FV0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC46Q96FV0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC46Q96FV0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC46Q96FV0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
LRRC46Q96FV0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC46Q96FV0 AC006455.2-201ENST00000429931 906 ntBASIC19.82■□□□□ 0.76
LRRC46Q96FV0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC46Q96FV0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC46Q96FV0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC46Q96FV0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC46Q96FV0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC46Q96FV0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC46Q96FV0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LRRC46Q96FV0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC46Q96FV0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC46Q96FV0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC46Q96FV0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LRRC46Q96FV0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC46Q96FV0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC46Q96FV0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC46Q96FV0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LRRC46Q96FV0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC46Q96FV0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC46Q96FV0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC46Q96FV0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC46Q96FV0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC46Q96FV0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC46Q96FV0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC46Q96FV0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC46Q96FV0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC46Q96FV0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC46Q96FV0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC46Q96FV0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC46Q96FV0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms