Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.33■□□□□ 0.85
TRUB1Q8WWH5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.33■□□□□ 0.85
TRUB1Q8WWH5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TRUB1Q8WWH5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRUB1Q8WWH5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
TRUB1Q8WWH5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRUB1Q8WWH5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRUB1Q8WWH5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 GPX1-201ENST00000419349 1106 ntBASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 AC011551.1-201ENST00000614101 683 ntBASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
TRUB1Q8WWH5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB1Q8WWH5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB1Q8WWH5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB1Q8WWH5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.31■□□□□ 0.84
TRUB1Q8WWH5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB1Q8WWH5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB1Q8WWH5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB1Q8WWH5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB1Q8WWH5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB1Q8WWH5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB1Q8WWH5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.31■□□□□ 0.84
TRUB1Q8WWH5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB1Q8WWH5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.31■□□□□ 0.84
TRUB1Q8WWH5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.31■□□□□ 0.84
TRUB1Q8WWH5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB1Q8WWH5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB1Q8WWH5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB1Q8WWH5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB1Q8WWH5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRUB1Q8WWH5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB1Q8WWH5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRUB1Q8WWH5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB1Q8WWH5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.3■□□□□ 0.84
TRUB1Q8WWH5 MIR7108-201ENST00000614319 87 ntBASIC20.3■□□□□ 0.84
TRUB1Q8WWH5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB1Q8WWH5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB1Q8WWH5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB1Q8WWH5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB1Q8WWH5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB1Q8WWH5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
TRUB1Q8WWH5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB1Q8WWH5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB1Q8WWH5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB1Q8WWH5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB1Q8WWH5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB1Q8WWH5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB1Q8WWH5 AC079630.1-202ENST00000618127 1840 ntBASIC20.29■□□□□ 0.84
TRUB1Q8WWH5 AC092053.2-201ENST00000640557 1818 ntBASIC20.29■□□□□ 0.84
TRUB1Q8WWH5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
TRUB1Q8WWH5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRUB1Q8WWH5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRUB1Q8WWH5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRUB1Q8WWH5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.28■□□□□ 0.84
TRUB1Q8WWH5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRUB1Q8WWH5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRUB1Q8WWH5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.28■□□□□ 0.84
TRUB1Q8WWH5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.28■□□□□ 0.84
TRUB1Q8WWH5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.28■□□□□ 0.84
TRUB1Q8WWH5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRUB1Q8WWH5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.28■□□□□ 0.84
TRUB1Q8WWH5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB1Q8WWH5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRUB1Q8WWH5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB1Q8WWH5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRUB1Q8WWH5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB1Q8WWH5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB1Q8WWH5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TRUB1Q8WWH5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.27■□□□□ 0.84
TRUB1Q8WWH5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB1Q8WWH5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRUB1Q8WWH5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB1Q8WWH5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRUB1Q8WWH5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
TRUB1Q8WWH5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRUB1Q8WWH5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.27■□□□□ 0.83
TRUB1Q8WWH5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.27■□□□□ 0.83
TRUB1Q8WWH5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRUB1Q8WWH5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRUB1Q8WWH5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB1Q8WWH5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB1Q8WWH5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.26■□□□□ 0.83
TRUB1Q8WWH5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms