Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 AC079630.1-202ENST00000618127 1840 ntBASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TMEM40Q8WWA1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.39■■□□□ 1.5
TMEM40Q8WWA1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.39■■□□□ 1.5
TMEM40Q8WWA1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.39■■□□□ 1.49
TMEM40Q8WWA1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.39■■□□□ 1.49
TMEM40Q8WWA1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM40Q8WWA1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
TMEM40Q8WWA1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM40Q8WWA1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.38■■□□□ 1.49
TMEM40Q8WWA1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM40Q8WWA1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
TMEM40Q8WWA1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.38■■□□□ 1.49
TMEM40Q8WWA1 AC012414.1-201ENST00000556676 535 ntBASIC24.38■■□□□ 1.49
TMEM40Q8WWA1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.38■■□□□ 1.49
TMEM40Q8WWA1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.38■■□□□ 1.49
TMEM40Q8WWA1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM40Q8WWA1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.37■■□□□ 1.49
TMEM40Q8WWA1 AC027612.3-201ENST00000413684 1047 ntBASIC24.37■■□□□ 1.49
TMEM40Q8WWA1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.37■■□□□ 1.49
TMEM40Q8WWA1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TMEM40Q8WWA1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
TMEM40Q8WWA1 AL358852.1-201ENST00000623174 1268 ntBASIC24.37■■□□□ 1.49
TMEM40Q8WWA1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.37■■□□□ 1.49
TMEM40Q8WWA1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 DUX4L2-201ENST00000561772 1275 ntBASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 DUX4L6-201ENST00000626483 1275 ntBASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 DUX4L1-201ENST00000627662 1275 ntBASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 DUX4L8-201ENST00000629013 1275 ntBASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 DUX4L3-201ENST00000630187 1275 ntBASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 DUX4L7-201ENST00000630678 1275 ntBASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 DUX4L5-201ENST00000630834 1275 ntBASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TMEM40Q8WWA1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.35■■□□□ 1.49
TMEM40Q8WWA1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM40Q8WWA1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM40Q8WWA1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM40Q8WWA1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM40Q8WWA1 AC034268.1-201ENST00000441047 882 ntBASIC24.35■■□□□ 1.49
TMEM40Q8WWA1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.35■■□□□ 1.49
TMEM40Q8WWA1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM40Q8WWA1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.35■■□□□ 1.49
TMEM40Q8WWA1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.35■■□□□ 1.49
TMEM40Q8WWA1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM40Q8WWA1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.34■■□□□ 1.49
TMEM40Q8WWA1 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.34■■□□□ 1.49
TMEM40Q8WWA1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.34■■□□□ 1.49
TMEM40Q8WWA1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.34■■□□□ 1.49
TMEM40Q8WWA1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.34■■□□□ 1.49
TMEM40Q8WWA1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM40Q8WWA1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.33■■□□□ 1.49
TMEM40Q8WWA1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
TMEM40Q8WWA1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM40Q8WWA1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.33■■□□□ 1.48
TMEM40Q8WWA1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM40Q8WWA1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
TMEM40Q8WWA1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
TMEM40Q8WWA1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
TMEM40Q8WWA1 KRT18P5-201ENST00000436075 1291 ntBASIC24.32■■□□□ 1.48
TMEM40Q8WWA1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.32■■□□□ 1.48
TMEM40Q8WWA1 AP005435.1-201ENST00000529293 1178 ntBASIC24.32■■□□□ 1.48
TMEM40Q8WWA1 AL354811.1-201ENST00000610286 706 ntBASIC24.32■■□□□ 1.48
TMEM40Q8WWA1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM40Q8WWA1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM40Q8WWA1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM40Q8WWA1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM40Q8WWA1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM40Q8WWA1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM40Q8WWA1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM40Q8WWA1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM40Q8WWA1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.31■■□□□ 1.48
TMEM40Q8WWA1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM40Q8WWA1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.31■■□□□ 1.48
TMEM40Q8WWA1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM40Q8WWA1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM40Q8WWA1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.31■■□□□ 1.48
TMEM40Q8WWA1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.31■■□□□ 1.48
TMEM40Q8WWA1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM40Q8WWA1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.31■■□□□ 1.48
TMEM40Q8WWA1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM40Q8WWA1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM40Q8WWA1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.3■■□□□ 1.48
TMEM40Q8WWA1 AC123595.1-201ENST00000440769 1046 ntBASIC24.3■■□□□ 1.48
TMEM40Q8WWA1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.3■■□□□ 1.48
TMEM40Q8WWA1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.3■■□□□ 1.48
TMEM40Q8WWA1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms