Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 HTR7P1-202ENST00000624664 4411 ntBASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPTSSBQ8NFR3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 AC007952.6-201ENST00000573168 2673 ntBASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 AC003957.1-201ENST00000625108 2673 ntBASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPTSSBQ8NFR3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTSSBQ8NFR3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 AC022211.4-201ENST00000625094 2161 ntBASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 AC010501.1-201ENST00000606270 1962 ntBASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 AC137767.1-201ENST00000602918 1920 ntBASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTSSBQ8NFR3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 AC142472.1-201ENST00000612013 1741 ntBASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SPTSSBQ8NFR3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms