Protein–RNA interactions for Protein: Q8NEP9

ZNF555, Zinc finger protein 555, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF555Q8NEP9 MIR3648-1-201ENST00000615959 180 ntBASIC20.59■□□□□ 0.89
ZNF555Q8NEP9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF555Q8NEP9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF555Q8NEP9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF555Q8NEP9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF555Q8NEP9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF555Q8NEP9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF555Q8NEP9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF555Q8NEP9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF555Q8NEP9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF555Q8NEP9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF555Q8NEP9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
ZNF555Q8NEP9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF555Q8NEP9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF555Q8NEP9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF555Q8NEP9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF555Q8NEP9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF555Q8NEP9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF555Q8NEP9 AC026202.3-201ENST00000600805 1127 ntBASIC20.56■□□□□ 0.88
ZNF555Q8NEP9 RAP2CP1-202ENST00000605179 643 ntBASIC20.56■□□□□ 0.88
ZNF555Q8NEP9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ZNF555Q8NEP9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ZNF555Q8NEP9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 AC007029.1-201ENST00000604183 313 ntBASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF555Q8NEP9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
ZNF555Q8NEP9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF555Q8NEP9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF555Q8NEP9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF555Q8NEP9 AC079630.1-202ENST00000618127 1840 ntBASIC20.54■□□□□ 0.88
ZNF555Q8NEP9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ZNF555Q8NEP9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ZNF555Q8NEP9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ZNF555Q8NEP9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ZNF555Q8NEP9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF555Q8NEP9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF555Q8NEP9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF555Q8NEP9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF555Q8NEP9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF555Q8NEP9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
ZNF555Q8NEP9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF555Q8NEP9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF555Q8NEP9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF555Q8NEP9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF555Q8NEP9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF555Q8NEP9 AL592295.1-201ENST00000400984 884 ntBASIC20.52■□□□□ 0.88
ZNF555Q8NEP9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF555Q8NEP9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF555Q8NEP9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ZNF555Q8NEP9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ZNF555Q8NEP9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.52■□□□□ 0.87
ZNF555Q8NEP9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
ZNF555Q8NEP9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF555Q8NEP9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.52■□□□□ 0.87
ZNF555Q8NEP9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF555Q8NEP9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.51■□□□□ 0.87
ZNF555Q8NEP9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF555Q8NEP9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF555Q8NEP9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF555Q8NEP9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms