Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 AL592293.1-201ENST00000502889 1188 ntBASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 C11orf96-202ENST00000528572 1834 ntBASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 SPCS2P3-201ENST00000500401 656 ntBASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 AC007375.3-201ENST00000600936 2314 ntBASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 LONRF2P2-201ENST00000439212 571 ntBASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 AC139530.1-201ENST00000575312 1977 ntBASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms