Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ESRRAP2-201ENST00000418437 1549 ntBASIC20.33■□□□□ 0.85
LSMEM1Q8N8F7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
LSMEM1Q8N8F7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LSMEM1Q8N8F7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
LSMEM1Q8N8F7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LSMEM1Q8N8F7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSMEM1Q8N8F7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSMEM1Q8N8F7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LSMEM1Q8N8F7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
LSMEM1Q8N8F7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LSMEM1Q8N8F7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
LSMEM1Q8N8F7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
LSMEM1Q8N8F7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LSMEM1Q8N8F7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LSMEM1Q8N8F7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.32■□□□□ 0.84
LSMEM1Q8N8F7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.32■□□□□ 0.84
LSMEM1Q8N8F7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSMEM1Q8N8F7 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.32■□□□□ 0.84
LSMEM1Q8N8F7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LSMEM1Q8N8F7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LSMEM1Q8N8F7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSMEM1Q8N8F7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSMEM1Q8N8F7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSMEM1Q8N8F7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LSMEM1Q8N8F7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.32■□□□□ 0.84
LSMEM1Q8N8F7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSMEM1Q8N8F7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.31■□□□□ 0.84
LSMEM1Q8N8F7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSMEM1Q8N8F7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSMEM1Q8N8F7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.31■□□□□ 0.84
LSMEM1Q8N8F7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSMEM1Q8N8F7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSMEM1Q8N8F7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSMEM1Q8N8F7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LSMEM1Q8N8F7 AC009102.2-201ENST00000606772 1639 ntBASIC20.31■□□□□ 0.84
LSMEM1Q8N8F7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 DUX4L4-201ENST00000566884 1269 ntBASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSMEM1Q8N8F7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 RNF165-205ENST00000588679 2904 ntBASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 TSPY9P-201ENST00000440215 945 ntBASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 TSPY11P-201ENST00000442607 1045 ntBASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSMEM1Q8N8F7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.28■□□□□ 0.84
LSMEM1Q8N8F7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LSMEM1Q8N8F7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LSMEM1Q8N8F7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
LSMEM1Q8N8F7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSMEM1Q8N8F7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSMEM1Q8N8F7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LSMEM1Q8N8F7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSMEM1Q8N8F7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 UNC93B8-201ENST00000511903 705 ntBASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.27■□□□□ 0.84
LSMEM1Q8N8F7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
LSMEM1Q8N8F7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms