Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.7■■□□□ 1.06
CPSF7Q8N684 Z92544.1-202ENST00000571933 1220 ntBASIC21.7■■□□□ 1.06
CPSF7Q8N684 THA1P-201ENST00000590384 1145 ntBASIC21.7■■□□□ 1.06
CPSF7Q8N684 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF7Q8N684 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF7Q8N684 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF7Q8N684 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF7Q8N684 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.7■■□□□ 1.06
CPSF7Q8N684 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF7Q8N684 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.7■■□□□ 1.06
CPSF7Q8N684 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF7Q8N684 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF7Q8N684 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF7Q8N684 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
CPSF7Q8N684 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF7Q8N684 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.69■■□□□ 1.06
CPSF7Q8N684 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF7Q8N684 KRT18P24-201ENST00000344739 1156 ntBASIC21.69■■□□□ 1.06
CPSF7Q8N684 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF7Q8N684 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.69■■□□□ 1.06
CPSF7Q8N684 AC131212.1-201ENST00000613771 668 ntBASIC21.69■■□□□ 1.06
CPSF7Q8N684 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.69■■□□□ 1.06
CPSF7Q8N684 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.69■■□□□ 1.06
CPSF7Q8N684 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF7Q8N684 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF7Q8N684 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF7Q8N684 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.68■■□□□ 1.06
CPSF7Q8N684 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF7Q8N684 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF7Q8N684 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF7Q8N684 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF7Q8N684 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF7Q8N684 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CPSF7Q8N684 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.68■■□□□ 1.06
CPSF7Q8N684 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CPSF7Q8N684 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF7Q8N684 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.68■■□□□ 1.06
CPSF7Q8N684 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF7Q8N684 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF7Q8N684 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF7Q8N684 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF7Q8N684 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF7Q8N684 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF7Q8N684 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF7Q8N684 AC139530.1-201ENST00000575312 1977 ntBASIC21.67■■□□□ 1.06
CPSF7Q8N684 AC079630.1-202ENST00000618127 1840 ntBASIC21.67■■□□□ 1.06
CPSF7Q8N684 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CPSF7Q8N684 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CPSF7Q8N684 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF7Q8N684 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CPSF7Q8N684 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CPSF7Q8N684 AC120024.1-201ENST00000562672 995 ntBASIC21.67■■□□□ 1.06
CPSF7Q8N684 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF7Q8N684 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.67■■□□□ 1.06
CPSF7Q8N684 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF7Q8N684 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CPSF7Q8N684 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF7Q8N684 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CPSF7Q8N684 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF7Q8N684 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF7Q8N684 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF7Q8N684 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF7Q8N684 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF7Q8N684 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
CPSF7Q8N684 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CPSF7Q8N684 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF7Q8N684 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF7Q8N684 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF7Q8N684 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.65■■□□□ 1.06
CPSF7Q8N684 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF7Q8N684 BX664725.1-201ENST00000438252 379 ntBASIC21.65■■□□□ 1.06
CPSF7Q8N684 AL356441.2-201ENST00000443009 864 ntBASIC21.65■■□□□ 1.06
CPSF7Q8N684 KRT125P-201ENST00000546827 989 ntBASIC21.65■■□□□ 1.06
CPSF7Q8N684 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.65■■□□□ 1.06
CPSF7Q8N684 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF7Q8N684 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF7Q8N684 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CPSF7Q8N684 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CPSF7Q8N684 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CPSF7Q8N684 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPSF7Q8N684 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CPSF7Q8N684 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPSF7Q8N684 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CPSF7Q8N684 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF7Q8N684 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF7Q8N684 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF7Q8N684 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.64■■□□□ 1.05
CPSF7Q8N684 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CPSF7Q8N684 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF7Q8N684 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CPSF7Q8N684 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF7Q8N684 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
CPSF7Q8N684 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.64■■□□□ 1.05
CPSF7Q8N684 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF7Q8N684 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.63■■□□□ 1.05
CPSF7Q8N684 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF7Q8N684 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.63■■□□□ 1.05
CPSF7Q8N684 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF7Q8N684 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF7Q8N684 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms