Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 FP325331.1-202ENST00000623531 1380 ntBASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01561Q8N1V8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
LINC01561Q8N1V8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01561Q8N1V8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01561Q8N1V8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01561Q8N1V8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01561Q8N1V8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC01561Q8N1V8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01561Q8N1V8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC01561Q8N1V8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01561Q8N1V8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 BHLHE23-202ENST00000612929 1109 ntBASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 AC087742.1-201ENST00000575880 1738 ntBASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01561Q8N1V8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms