Protein–RNA interactions for Protein: Q86YD5

LDLRAD3, Low-density lipoprotein receptor class A domain-containing protein 3, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3Q86YD5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.85■□□□□ 0.61
LDLRAD3Q86YD5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDLRAD3Q86YD5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.85■□□□□ 0.61
LDLRAD3Q86YD5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.85■□□□□ 0.61
LDLRAD3Q86YD5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDLRAD3Q86YD5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LDLRAD3Q86YD5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDLRAD3Q86YD5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LDLRAD3Q86YD5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDLRAD3Q86YD5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.85■□□□□ 0.61
LDLRAD3Q86YD5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.85■□□□□ 0.61
LDLRAD3Q86YD5 AF131216.4-201ENST00000638924 1588 ntBASIC18.85■□□□□ 0.61
LDLRAD3Q86YD5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDLRAD3Q86YD5 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.84■□□□□ 0.61
LDLRAD3Q86YD5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.84■□□□□ 0.61
LDLRAD3Q86YD5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.84■□□□□ 0.61
LDLRAD3Q86YD5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LDLRAD3Q86YD5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LDLRAD3Q86YD5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LDLRAD3Q86YD5 MTDHP2-201ENST00000601468 714 ntBASIC18.84■□□□□ 0.61
LDLRAD3Q86YD5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDLRAD3Q86YD5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDLRAD3Q86YD5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDLRAD3Q86YD5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.84■□□□□ 0.61
LDLRAD3Q86YD5 RNF165-205ENST00000588679 2904 ntBASIC18.84■□□□□ 0.61
LDLRAD3Q86YD5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
LDLRAD3Q86YD5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LDLRAD3Q86YD5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LDLRAD3Q86YD5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LDLRAD3Q86YD5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
LDLRAD3Q86YD5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LDLRAD3Q86YD5 AC010997.5-201ENST00000609182 354 ntBASIC18.83■□□□□ 0.6
LDLRAD3Q86YD5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAD3Q86YD5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAD3Q86YD5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAD3Q86YD5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAD3Q86YD5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAD3Q86YD5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
LDLRAD3Q86YD5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 AC008406.3-201ENST00000620001 1374 ntBASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.82■□□□□ 0.6
LDLRAD3Q86YD5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 MIR6724-1-201ENST00000616420 92 ntBASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 MIR6724-2-201ENST00000616483 92 ntBASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 MIR6724-4-201ENST00000617390 92 ntBASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 MIR6724-3-201ENST00000622482 92 ntBASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAD3Q86YD5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 AC131274.2-201ENST00000580697 1507 ntBASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.8■□□□□ 0.6
LDLRAD3Q86YD5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAD3Q86YD5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LDLRAD3Q86YD5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAD3Q86YD5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
LDLRAD3Q86YD5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAD3Q86YD5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAD3Q86YD5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms