Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS36Q86VN1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS36Q86VN1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
VPS36Q86VN1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
VPS36Q86VN1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
VPS36Q86VN1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS36Q86VN1 AC005703.6-201ENST00000623265 1329 ntBASIC23.86■■□□□ 1.41
VPS36Q86VN1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS36Q86VN1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS36Q86VN1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
VPS36Q86VN1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS36Q86VN1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS36Q86VN1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.86■■□□□ 1.41
VPS36Q86VN1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS36Q86VN1 MIR6722-201ENST00000617286 78 ntBASIC23.86■■□□□ 1.41
VPS36Q86VN1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.86■■□□□ 1.41
VPS36Q86VN1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.86■■□□□ 1.41
VPS36Q86VN1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
VPS36Q86VN1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
VPS36Q86VN1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS36Q86VN1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS36Q86VN1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS36Q86VN1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS36Q86VN1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
VPS36Q86VN1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.85■■□□□ 1.41
VPS36Q86VN1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.85■■□□□ 1.41
VPS36Q86VN1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.85■■□□□ 1.41
VPS36Q86VN1 AC242852.2-201ENST00000615738 1807 ntBASIC23.85■■□□□ 1.41
VPS36Q86VN1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.85■■□□□ 1.41
VPS36Q86VN1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
VPS36Q86VN1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
VPS36Q86VN1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS36Q86VN1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS36Q86VN1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS36Q86VN1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS36Q86VN1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
VPS36Q86VN1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS36Q86VN1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
VPS36Q86VN1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS36Q86VN1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS36Q86VN1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
VPS36Q86VN1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS36Q86VN1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS36Q86VN1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS36Q86VN1 AC127496.7-201ENST00000625110 1798 ntBASIC23.84■■□□□ 1.41
VPS36Q86VN1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
VPS36Q86VN1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS36Q86VN1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS36Q86VN1 BX664725.1-201ENST00000438252 379 ntBASIC23.84■■□□□ 1.41
VPS36Q86VN1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.84■■□□□ 1.41
VPS36Q86VN1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS36Q86VN1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
VPS36Q86VN1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.84■■□□□ 1.41
VPS36Q86VN1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.84■■□□□ 1.41
VPS36Q86VN1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.84■■□□□ 1.41
VPS36Q86VN1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS36Q86VN1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS36Q86VN1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.83■■□□□ 1.41
VPS36Q86VN1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
VPS36Q86VN1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.83■■□□□ 1.41
VPS36Q86VN1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
VPS36Q86VN1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.83■■□□□ 1.41
VPS36Q86VN1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS36Q86VN1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
VPS36Q86VN1 AC021242.3-201ENST00000607598 1377 ntBASIC23.82■■□□□ 1.4
VPS36Q86VN1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS36Q86VN1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.82■■□□□ 1.4
VPS36Q86VN1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS36Q86VN1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS36Q86VN1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.82■■□□□ 1.4
VPS36Q86VN1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS36Q86VN1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS36Q86VN1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VPS36Q86VN1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
VPS36Q86VN1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS36Q86VN1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS36Q86VN1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS36Q86VN1 AC009299.2-201ENST00000482477 511 ntBASIC23.81■■□□□ 1.4
VPS36Q86VN1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.81■■□□□ 1.4
VPS36Q86VN1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.81■■□□□ 1.4
VPS36Q86VN1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS36Q86VN1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS36Q86VN1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.8■■□□□ 1.4
VPS36Q86VN1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS36Q86VN1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS36Q86VN1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS36Q86VN1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS36Q86VN1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.8■■□□□ 1.4
VPS36Q86VN1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS36Q86VN1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
VPS36Q86VN1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
VPS36Q86VN1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
VPS36Q86VN1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS36Q86VN1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS36Q86VN1 LINC01529-204ENST00000636474 1715 ntBASIC23.79■■□□□ 1.4
VPS36Q86VN1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
VPS36Q86VN1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VPS36Q86VN1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VPS36Q86VN1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS36Q86VN1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms