Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRTM1Q86UE6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRTM1Q86UE6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LRRTM1Q86UE6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRTM1Q86UE6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.3■□□□□ 0.68
LRRTM1Q86UE6 U85056.1-201ENST00000616429 682 ntBASIC19.3■□□□□ 0.68
LRRTM1Q86UE6 AC087742.1-201ENST00000575880 1738 ntBASIC19.3■□□□□ 0.68
LRRTM1Q86UE6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRTM1Q86UE6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LRRTM1Q86UE6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRTM1Q86UE6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
LRRTM1Q86UE6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRTM1Q86UE6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LRRTM1Q86UE6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRTM1Q86UE6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRTM1Q86UE6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRTM1Q86UE6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LRRTM1Q86UE6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRTM1Q86UE6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRTM1Q86UE6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRTM1Q86UE6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRTM1Q86UE6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRTM1Q86UE6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRTM1Q86UE6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRTM1Q86UE6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRTM1Q86UE6 AC004448.1-201ENST00000458332 883 ntBASIC19.28■□□□□ 0.68
LRRTM1Q86UE6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRTM1Q86UE6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRTM1Q86UE6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRTM1Q86UE6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRTM1Q86UE6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRTM1Q86UE6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 AC120024.1-201ENST00000562672 995 ntBASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRTM1Q86UE6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRTM1Q86UE6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRTM1Q86UE6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRTM1Q86UE6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRTM1Q86UE6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRTM1Q86UE6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRTM1Q86UE6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRTM1Q86UE6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRTM1Q86UE6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRTM1Q86UE6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRTM1Q86UE6 AL024507.2-201ENST00000606070 2574 ntBASIC19.25■□□□□ 0.67
LRRTM1Q86UE6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRTM1Q86UE6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
LRRTM1Q86UE6 KRT18P60-201ENST00000312876 1297 ntBASIC19.25■□□□□ 0.67
LRRTM1Q86UE6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LRRTM1Q86UE6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRTM1Q86UE6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.25■□□□□ 0.67
LRRTM1Q86UE6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRTM1Q86UE6 FBXW4P1-201ENST00000426721 2239 ntBASIC19.25■□□□□ 0.67
LRRTM1Q86UE6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRTM1Q86UE6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRTM1Q86UE6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRTM1Q86UE6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM1Q86UE6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LRRTM1Q86UE6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM1Q86UE6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRTM1Q86UE6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRTM1Q86UE6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LRRTM1Q86UE6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM1Q86UE6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.23■□□□□ 0.67
LRRTM1Q86UE6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LRRTM1Q86UE6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM1Q86UE6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM1Q86UE6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRTM1Q86UE6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.23■□□□□ 0.67
LRRTM1Q86UE6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM1Q86UE6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LRRTM1Q86UE6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM1Q86UE6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM1Q86UE6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM1Q86UE6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.22■□□□□ 0.67
LRRTM1Q86UE6 RARRES2P2-201ENST00000394842 485 ntBASIC19.22■□□□□ 0.67
LRRTM1Q86UE6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.22■□□□□ 0.67
LRRTM1Q86UE6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM1Q86UE6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LRRTM1Q86UE6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRTM1Q86UE6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRTM1Q86UE6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRTM1Q86UE6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRTM1Q86UE6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms