Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 CCDC92B-201ENST00000575506 885 ntBASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RAI1Q7Z5J4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 TERF1P2-201ENST00000583350 1212 ntBASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAI1Q7Z5J4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RAI1Q7Z5J4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RAI1Q7Z5J4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.09■□□□□ 0.65
RAI1Q7Z5J4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RAI1Q7Z5J4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RAI1Q7Z5J4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RAI1Q7Z5J4 MIR6084-201ENST00000622012 110 ntBASIC19.09■□□□□ 0.65
RAI1Q7Z5J4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.09■□□□□ 0.65
RAI1Q7Z5J4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAI1Q7Z5J4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
RAI1Q7Z5J4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RAI1Q7Z5J4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RAI1Q7Z5J4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAI1Q7Z5J4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
RAI1Q7Z5J4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.08■□□□□ 0.65
RAI1Q7Z5J4 AL137784.2-201ENST00000607332 1000 ntBASIC19.08■□□□□ 0.65
RAI1Q7Z5J4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.08■□□□□ 0.65
RAI1Q7Z5J4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RAI1Q7Z5J4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAI1Q7Z5J4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAI1Q7Z5J4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAI1Q7Z5J4 FP325331.1-202ENST00000623531 1380 ntBASIC19.08■□□□□ 0.64
RAI1Q7Z5J4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.08■□□□□ 0.64
RAI1Q7Z5J4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAI1Q7Z5J4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.08■□□□□ 0.64
RAI1Q7Z5J4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAI1Q7Z5J4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
RAI1Q7Z5J4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.08■□□□□ 0.64
RAI1Q7Z5J4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAI1Q7Z5J4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAI1Q7Z5J4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.07■□□□□ 0.64
RAI1Q7Z5J4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
RAI1Q7Z5J4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RAI1Q7Z5J4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.07■□□□□ 0.64
RAI1Q7Z5J4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAI1Q7Z5J4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.07■□□□□ 0.64
RAI1Q7Z5J4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAI1Q7Z5J4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAI1Q7Z5J4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
RAI1Q7Z5J4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RAI1Q7Z5J4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
RAI1Q7Z5J4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.07■□□□□ 0.64
RAI1Q7Z5J4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAI1Q7Z5J4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.05■□□□□ 0.64
RAI1Q7Z5J4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAI1Q7Z5J4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAI1Q7Z5J4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAI1Q7Z5J4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms