Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LYSMD3Q7Z3D4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LYSMD3Q7Z3D4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
LYSMD3Q7Z3D4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LYSMD3Q7Z3D4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LYSMD3Q7Z3D4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
LYSMD3Q7Z3D4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
LYSMD3Q7Z3D4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
LYSMD3Q7Z3D4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LYSMD3Q7Z3D4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.33■■□□□ 1.17
LYSMD3Q7Z3D4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
LYSMD3Q7Z3D4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
LYSMD3Q7Z3D4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LYSMD3Q7Z3D4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
LYSMD3Q7Z3D4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LYSMD3Q7Z3D4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.33■■□□□ 1.17
LYSMD3Q7Z3D4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.33■■□□□ 1.17
LYSMD3Q7Z3D4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
LYSMD3Q7Z3D4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
LYSMD3Q7Z3D4 CLDN5-201ENST00000403084 2357 ntBASIC22.33■■□□□ 1.16
LYSMD3Q7Z3D4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
LYSMD3Q7Z3D4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.33■■□□□ 1.16
LYSMD3Q7Z3D4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
LYSMD3Q7Z3D4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LYSMD3Q7Z3D4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LYSMD3Q7Z3D4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LYSMD3Q7Z3D4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LYSMD3Q7Z3D4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.32■■□□□ 1.16
LYSMD3Q7Z3D4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.32■■□□□ 1.16
LYSMD3Q7Z3D4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.32■■□□□ 1.16
LYSMD3Q7Z3D4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
LYSMD3Q7Z3D4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LYSMD3Q7Z3D4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.32■■□□□ 1.16
LYSMD3Q7Z3D4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LYSMD3Q7Z3D4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 AC092171.4-201ENST00000609130 632 ntBASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LYSMD3Q7Z3D4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
LYSMD3Q7Z3D4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LYSMD3Q7Z3D4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LYSMD3Q7Z3D4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
LYSMD3Q7Z3D4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.3■■□□□ 1.16
LYSMD3Q7Z3D4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
LYSMD3Q7Z3D4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 pRNA.6-201ENST00000610482 90 ntBASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 pRNA.5-201ENST00000612139 90 ntBASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 pRNA.11-201ENST00000618423 90 ntBASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 pRNA.13-201ENST00000619112 90 ntBASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LYSMD3Q7Z3D4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.28■■□□□ 1.16
LYSMD3Q7Z3D4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.28■■□□□ 1.16
LYSMD3Q7Z3D4 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.28■■□□□ 1.16
LYSMD3Q7Z3D4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LYSMD3Q7Z3D4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LYSMD3Q7Z3D4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
LYSMD3Q7Z3D4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.28■■□□□ 1.16
LYSMD3Q7Z3D4 SYT6-210ENST00000641643 1587 ntBASIC22.28■■□□□ 1.16
LYSMD3Q7Z3D4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.28■■□□□ 1.16
LYSMD3Q7Z3D4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LYSMD3Q7Z3D4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LYSMD3Q7Z3D4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LYSMD3Q7Z3D4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.27■■□□□ 1.16
LYSMD3Q7Z3D4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
LYSMD3Q7Z3D4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LYSMD3Q7Z3D4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LYSMD3Q7Z3D4 SERBP1P1-201ENST00000396021 1160 ntBASIC22.27■■□□□ 1.16
LYSMD3Q7Z3D4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.27■■□□□ 1.16
LYSMD3Q7Z3D4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.27■■□□□ 1.16
LYSMD3Q7Z3D4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LYSMD3Q7Z3D4 DUX4L19-201ENST00000557448 1267 ntBASIC22.27■■□□□ 1.16
LYSMD3Q7Z3D4 MIR3181-201ENST00000578512 73 ntBASIC22.27■■□□□ 1.16
LYSMD3Q7Z3D4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.27■■□□□ 1.16
LYSMD3Q7Z3D4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms