Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
KDM3BQ7LBC6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
KDM3BQ7LBC6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
KDM3BQ7LBC6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
KDM3BQ7LBC6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC28.73■■■□□ 2.19
KDM3BQ7LBC6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
KDM3BQ7LBC6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
KDM3BQ7LBC6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC28.73■■■□□ 2.19
KDM3BQ7LBC6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
KDM3BQ7LBC6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC28.72■■■□□ 2.19
KDM3BQ7LBC6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
KDM3BQ7LBC6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC28.72■■■□□ 2.19
KDM3BQ7LBC6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC28.72■■■□□ 2.19
KDM3BQ7LBC6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
KDM3BQ7LBC6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC28.72■■■□□ 2.19
KDM3BQ7LBC6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
KDM3BQ7LBC6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
KDM3BQ7LBC6 MIR572-201ENST00000384983 95 ntBASIC28.72■■■□□ 2.19
KDM3BQ7LBC6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
KDM3BQ7LBC6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
KDM3BQ7LBC6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
KDM3BQ7LBC6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC28.71■■■□□ 2.19
KDM3BQ7LBC6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
KDM3BQ7LBC6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
KDM3BQ7LBC6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
KDM3BQ7LBC6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC28.71■■■□□ 2.19
KDM3BQ7LBC6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
KDM3BQ7LBC6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
KDM3BQ7LBC6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
KDM3BQ7LBC6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.7■■■□□ 2.19
KDM3BQ7LBC6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
KDM3BQ7LBC6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
KDM3BQ7LBC6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC28.7■■■□□ 2.19
KDM3BQ7LBC6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
KDM3BQ7LBC6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
KDM3BQ7LBC6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
KDM3BQ7LBC6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC28.7■■■□□ 2.18
KDM3BQ7LBC6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC28.7■■■□□ 2.18
KDM3BQ7LBC6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.69■■■□□ 2.18
KDM3BQ7LBC6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
KDM3BQ7LBC6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
KDM3BQ7LBC6 AC004687.1-201ENST00000579003 1625 ntBASIC28.69■■■□□ 2.18
KDM3BQ7LBC6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC28.69■■■□□ 2.18
KDM3BQ7LBC6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
KDM3BQ7LBC6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
KDM3BQ7LBC6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
KDM3BQ7LBC6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC28.68■■■□□ 2.18
KDM3BQ7LBC6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.68■■■□□ 2.18
KDM3BQ7LBC6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
KDM3BQ7LBC6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
KDM3BQ7LBC6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
KDM3BQ7LBC6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC28.68■■■□□ 2.18
KDM3BQ7LBC6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
KDM3BQ7LBC6 AC092068.2-201ENST00000590491 1708 ntBASIC28.68■■■□□ 2.18
KDM3BQ7LBC6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 MIR5787-201ENST00000611784 55 ntBASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.67■■■□□ 2.18
KDM3BQ7LBC6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
KDM3BQ7LBC6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
KDM3BQ7LBC6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
KDM3BQ7LBC6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
KDM3BQ7LBC6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
KDM3BQ7LBC6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
KDM3BQ7LBC6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
KDM3BQ7LBC6 AK1-201ENST00000223836 736 ntTSL 3 BASIC28.65■■■□□ 2.18
KDM3BQ7LBC6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC28.65■■■□□ 2.18
KDM3BQ7LBC6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
KDM3BQ7LBC6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC28.65■■■□□ 2.18
KDM3BQ7LBC6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
KDM3BQ7LBC6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
KDM3BQ7LBC6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC28.64■■■□□ 2.18
KDM3BQ7LBC6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
KDM3BQ7LBC6 AP005435.1-201ENST00000529293 1178 ntBASIC28.64■■■□□ 2.18
KDM3BQ7LBC6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC28.64■■■□□ 2.18
KDM3BQ7LBC6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
KDM3BQ7LBC6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
KDM3BQ7LBC6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
KDM3BQ7LBC6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
KDM3BQ7LBC6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
KDM3BQ7LBC6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
KDM3BQ7LBC6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
KDM3BQ7LBC6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC28.63■■■□□ 2.17
KDM3BQ7LBC6 AC104564.3-201ENST00000582367 638 ntBASIC28.63■■■□□ 2.17
KDM3BQ7LBC6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC28.63■■■□□ 2.17
KDM3BQ7LBC6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
KDM3BQ7LBC6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
KDM3BQ7LBC6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC28.63■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms