Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.25■■□□□ 1.15
RAPH1Q70E73 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.25■■□□□ 1.15
RAPH1Q70E73 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RAPH1Q70E73 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAPH1Q70E73 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RAPH1Q70E73 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RAPH1Q70E73 AC103724.3-201ENST00000564481 992 ntBASIC22.24■■□□□ 1.15
RAPH1Q70E73 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAPH1Q70E73 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAPH1Q70E73 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAPH1Q70E73 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAPH1Q70E73 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RAPH1Q70E73 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAPH1Q70E73 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAPH1Q70E73 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.22■■□□□ 1.15
RAPH1Q70E73 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RAPH1Q70E73 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAPH1Q70E73 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.22■■□□□ 1.15
RAPH1Q70E73 SNX5-217ENST00000606557 1087 ntBASIC22.22■■□□□ 1.15
RAPH1Q70E73 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RAPH1Q70E73 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAPH1Q70E73 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RAPH1Q70E73 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAPH1Q70E73 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAPH1Q70E73 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RAPH1Q70E73 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.21■■□□□ 1.15
RAPH1Q70E73 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
RAPH1Q70E73 AL024507.2-201ENST00000606070 2574 ntBASIC22.21■■□□□ 1.15
RAPH1Q70E73 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAPH1Q70E73 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAPH1Q70E73 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAPH1Q70E73 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAPH1Q70E73 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.21■■□□□ 1.15
RAPH1Q70E73 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAPH1Q70E73 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.21■■□□□ 1.15
RAPH1Q70E73 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.21■■□□□ 1.15
RAPH1Q70E73 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.21■■□□□ 1.15
RAPH1Q70E73 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RAPH1Q70E73 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAPH1Q70E73 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.21■■□□□ 1.15
RAPH1Q70E73 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
RAPH1Q70E73 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAPH1Q70E73 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAPH1Q70E73 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RAPH1Q70E73 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.2■■□□□ 1.14
RAPH1Q70E73 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.2■■□□□ 1.14
RAPH1Q70E73 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.2■■□□□ 1.14
RAPH1Q70E73 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RAPH1Q70E73 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAPH1Q70E73 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
RAPH1Q70E73 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAPH1Q70E73 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
RAPH1Q70E73 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPH1Q70E73 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPH1Q70E73 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPH1Q70E73 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
RAPH1Q70E73 AL031848.2-201ENST00000607670 837 ntBASIC22.19■■□□□ 1.14
RAPH1Q70E73 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPH1Q70E73 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPH1Q70E73 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPH1Q70E73 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPH1Q70E73 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPH1Q70E73 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
RAPH1Q70E73 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPH1Q70E73 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RAPH1Q70E73 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.18■■□□□ 1.14
RAPH1Q70E73 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPH1Q70E73 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPH1Q70E73 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPH1Q70E73 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPH1Q70E73 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPH1Q70E73 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.18■■□□□ 1.14
RAPH1Q70E73 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RAPH1Q70E73 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.18■■□□□ 1.14
RAPH1Q70E73 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.18■■□□□ 1.14
RAPH1Q70E73 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPH1Q70E73 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPH1Q70E73 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.18■■□□□ 1.14
RAPH1Q70E73 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.18■■□□□ 1.14
RAPH1Q70E73 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RAPH1Q70E73 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPH1Q70E73 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.17■■□□□ 1.14
RAPH1Q70E73 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPH1Q70E73 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPH1Q70E73 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPH1Q70E73 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.17■■□□□ 1.14
RAPH1Q70E73 AC137630.3-201ENST00000607245 391 ntBASIC22.17■■□□□ 1.14
RAPH1Q70E73 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPH1Q70E73 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RAPH1Q70E73 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.17■■□□□ 1.14
RAPH1Q70E73 LINC00526-201ENST00000581067 1875 ntBASIC22.17■■□□□ 1.14
RAPH1Q70E73 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPH1Q70E73 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.17■■□□□ 1.14
RAPH1Q70E73 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPH1Q70E73 ESRRAP2-201ENST00000418437 1549 ntBASIC22.16■■□□□ 1.14
RAPH1Q70E73 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPH1Q70E73 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.16■■□□□ 1.14
RAPH1Q70E73 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.16■■□□□ 1.14
RAPH1Q70E73 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.16■■□□□ 1.14
RAPH1Q70E73 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms