Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 AL499627.2-201ENST00000606283 725 ntBASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COLCA1Q6ZS62 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COLCA1Q6ZS62 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COLCA1Q6ZS62 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COLCA1Q6ZS62 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.18■□□□□ 0.66
COLCA1Q6ZS62 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COLCA1Q6ZS62 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.18■□□□□ 0.66
COLCA1Q6ZS62 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COLCA1Q6ZS62 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.18■□□□□ 0.66
COLCA1Q6ZS62 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COLCA1Q6ZS62 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA1Q6ZS62 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 ESRRAP2-201ENST00000418437 1549 ntBASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.15■□□□□ 0.66
COLCA1Q6ZS62 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.14■□□□□ 0.66
COLCA1Q6ZS62 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COLCA1Q6ZS62 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.14■□□□□ 0.65
COLCA1Q6ZS62 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.14■□□□□ 0.65
COLCA1Q6ZS62 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.14■□□□□ 0.65
COLCA1Q6ZS62 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.14■□□□□ 0.65
COLCA1Q6ZS62 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COLCA1Q6ZS62 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COLCA1Q6ZS62 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
COLCA1Q6ZS62 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COLCA1Q6ZS62 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 SRD5A1P1-201ENST00000442297 786 ntBASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 AC099791.2-201ENST00000605725 427 ntBASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 MIR4466-201ENST00000606121 54 ntBASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COLCA1Q6ZS62 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms