Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.15■□□□□ 0.82
TMEM53Q6P2H8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TMEM53Q6P2H8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM53Q6P2H8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TMEM53Q6P2H8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 AC127496.7-201ENST00000625110 1798 ntBASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 AC009299.2-201ENST00000482477 511 ntBASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 Z92544.1-202ENST00000571933 1220 ntBASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TMEM53Q6P2H8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM53Q6P2H8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TMEM53Q6P2H8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM53Q6P2H8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM53Q6P2H8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEM53Q6P2H8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM53Q6P2H8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEM53Q6P2H8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.13■□□□□ 0.81
TMEM53Q6P2H8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM53Q6P2H8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM53Q6P2H8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM53Q6P2H8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM53Q6P2H8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
TMEM53Q6P2H8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
TMEM53Q6P2H8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM53Q6P2H8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM53Q6P2H8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM53Q6P2H8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM53Q6P2H8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM53Q6P2H8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.12■□□□□ 0.81
TMEM53Q6P2H8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM53Q6P2H8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM53Q6P2H8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM53Q6P2H8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM53Q6P2H8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM53Q6P2H8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEM53Q6P2H8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM53Q6P2H8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEM53Q6P2H8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.11■□□□□ 0.81
TMEM53Q6P2H8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM53Q6P2H8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TMEM53Q6P2H8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEM53Q6P2H8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM53Q6P2H8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM53Q6P2H8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM53Q6P2H8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 LINC00526-201ENST00000581067 1875 ntBASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM53Q6P2H8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.09■□□□□ 0.81
TMEM53Q6P2H8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM53Q6P2H8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM53Q6P2H8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM53Q6P2H8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM53Q6P2H8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TMEM53Q6P2H8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TMEM53Q6P2H8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TMEM53Q6P2H8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM53Q6P2H8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TMEM53Q6P2H8 AC239859.2-201ENST00000444165 318 ntBASIC20.09■□□□□ 0.81
TMEM53Q6P2H8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM53Q6P2H8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.09■□□□□ 0.81
TMEM53Q6P2H8 AC021242.3-201ENST00000607598 1377 ntBASIC20.08■□□□□ 0.81
TMEM53Q6P2H8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TMEM53Q6P2H8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEM53Q6P2H8 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.08■□□□□ 0.81
TMEM53Q6P2H8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.08■□□□□ 0.81
TMEM53Q6P2H8 AC131274.2-201ENST00000580697 1507 ntBASIC20.08■□□□□ 0.81
TMEM53Q6P2H8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.08■□□□□ 0.81
TMEM53Q6P2H8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM53Q6P2H8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM53Q6P2H8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM53Q6P2H8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM53Q6P2H8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM53Q6P2H8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM53Q6P2H8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.08■□□□□ 0.8
TMEM53Q6P2H8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
TMEM53Q6P2H8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
TMEM53Q6P2H8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms