Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144NLQ6NUI1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144NLQ6NUI1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCDC144NLQ6NUI1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC144NLQ6NUI1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCDC144NLQ6NUI1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144NLQ6NUI1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144NLQ6NUI1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CCDC144NLQ6NUI1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC144NLQ6NUI1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144NLQ6NUI1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144NLQ6NUI1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC144NLQ6NUI1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC144NLQ6NUI1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144NLQ6NUI1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
CCDC144NLQ6NUI1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144NLQ6NUI1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC144NLQ6NUI1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC144NLQ6NUI1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCDC144NLQ6NUI1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144NLQ6NUI1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144NLQ6NUI1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144NLQ6NUI1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CCDC144NLQ6NUI1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC144NLQ6NUI1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
CCDC144NLQ6NUI1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC144NLQ6NUI1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
CCDC144NLQ6NUI1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 AL499627.2-201ENST00000606283 725 ntBASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 pRNA.6-201ENST00000610482 90 ntBASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 pRNA.5-201ENST00000612139 90 ntBASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 pRNA.11-201ENST00000618423 90 ntBASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 pRNA.13-201ENST00000619112 90 ntBASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 DUSP8P5-201ENST00000422884 1815 ntBASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC144NLQ6NUI1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 AC011298.3-201ENST00000615796 283 ntBASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 DUSP8P3-201ENST00000399571 1760 ntBASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC144NLQ6NUI1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 MIR3181-201ENST00000578512 73 ntBASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC144NLQ6NUI1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC144NLQ6NUI1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC144NLQ6NUI1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC144NLQ6NUI1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC144NLQ6NUI1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC144NLQ6NUI1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC144NLQ6NUI1 AC006455.2-201ENST00000429931 906 ntBASIC17.92■□□□□ 0.46
CCDC144NLQ6NUI1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC144NLQ6NUI1 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC144NLQ6NUI1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC144NLQ6NUI1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CCDC144NLQ6NUI1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms