Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PPP4R3AQ6IN85 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.28■■□□□ 1.64
PPP4R3AQ6IN85 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PPP4R3AQ6IN85 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PPP4R3AQ6IN85 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.28■■□□□ 1.64
PPP4R3AQ6IN85 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PPP4R3AQ6IN85 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PPP4R3AQ6IN85 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.27■■□□□ 1.64
PPP4R3AQ6IN85 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.27■■□□□ 1.64
PPP4R3AQ6IN85 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PPP4R3AQ6IN85 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PPP4R3AQ6IN85 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.27■■□□□ 1.64
PPP4R3AQ6IN85 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.27■■□□□ 1.64
PPP4R3AQ6IN85 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.27■■□□□ 1.64
PPP4R3AQ6IN85 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PPP4R3AQ6IN85 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PPP4R3AQ6IN85 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPP4R3AQ6IN85 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPP4R3AQ6IN85 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPP4R3AQ6IN85 MIR3181-201ENST00000578512 73 ntBASIC25.26■■□□□ 1.63
PPP4R3AQ6IN85 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.26■■□□□ 1.63
PPP4R3AQ6IN85 AL138724.1-201ENST00000606771 1088 ntBASIC25.26■■□□□ 1.63
PPP4R3AQ6IN85 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PPP4R3AQ6IN85 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PPP4R3AQ6IN85 SYT6-210ENST00000641643 1587 ntBASIC25.26■■□□□ 1.63
PPP4R3AQ6IN85 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PPP4R3AQ6IN85 SERBP1P1-201ENST00000396021 1160 ntBASIC25.25■■□□□ 1.63
PPP4R3AQ6IN85 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.25■■□□□ 1.63
PPP4R3AQ6IN85 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.25■■□□□ 1.63
PPP4R3AQ6IN85 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PPP4R3AQ6IN85 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.25■■□□□ 1.63
PPP4R3AQ6IN85 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PPP4R3AQ6IN85 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
PPP4R3AQ6IN85 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PPP4R3AQ6IN85 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PPP4R3AQ6IN85 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PPP4R3AQ6IN85 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.24■■□□□ 1.63
PPP4R3AQ6IN85 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.24■■□□□ 1.63
PPP4R3AQ6IN85 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.24■■□□□ 1.63
PPP4R3AQ6IN85 pRNA.6-201ENST00000610482 90 ntBASIC25.24■■□□□ 1.63
PPP4R3AQ6IN85 pRNA.5-201ENST00000612139 90 ntBASIC25.24■■□□□ 1.63
PPP4R3AQ6IN85 pRNA.11-201ENST00000618423 90 ntBASIC25.24■■□□□ 1.63
PPP4R3AQ6IN85 pRNA.13-201ENST00000619112 90 ntBASIC25.24■■□□□ 1.63
PPP4R3AQ6IN85 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
PPP4R3AQ6IN85 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.23■■□□□ 1.63
PPP4R3AQ6IN85 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PPP4R3AQ6IN85 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.23■■□□□ 1.63
PPP4R3AQ6IN85 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.23■■□□□ 1.63
PPP4R3AQ6IN85 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.23■■□□□ 1.63
PPP4R3AQ6IN85 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PPP4R3AQ6IN85 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.23■■□□□ 1.63
PPP4R3AQ6IN85 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
PPP4R3AQ6IN85 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.23■■□□□ 1.63
PPP4R3AQ6IN85 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PPP4R3AQ6IN85 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3AQ6IN85 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3AQ6IN85 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3AQ6IN85 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3AQ6IN85 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3AQ6IN85 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3AQ6IN85 UNC93B3-201ENST00000308076 687 ntBASIC25.22■■□□□ 1.63
PPP4R3AQ6IN85 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3AQ6IN85 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.22■■□□□ 1.63
PPP4R3AQ6IN85 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3AQ6IN85 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3AQ6IN85 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
PPP4R3AQ6IN85 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3AQ6IN85 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.21■■□□□ 1.63
PPP4R3AQ6IN85 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
PPP4R3AQ6IN85 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PPP4R3AQ6IN85 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PPP4R3AQ6IN85 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.21■■□□□ 1.63
PPP4R3AQ6IN85 AC011298.3-201ENST00000615796 283 ntBASIC25.21■■□□□ 1.63
PPP4R3AQ6IN85 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PPP4R3AQ6IN85 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
PPP4R3AQ6IN85 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.2■■□□□ 1.62
PPP4R3AQ6IN85 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
PPP4R3AQ6IN85 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PPP4R3AQ6IN85 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.2■■□□□ 1.62
PPP4R3AQ6IN85 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PPP4R3AQ6IN85 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
PPP4R3AQ6IN85 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.2■■□□□ 1.62
PPP4R3AQ6IN85 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PPP4R3AQ6IN85 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PPP4R3AQ6IN85 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PPP4R3AQ6IN85 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PPP4R3AQ6IN85 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PPP4R3AQ6IN85 AC096631.2-201ENST00000436136 790 ntBASIC25.19■■□□□ 1.62
PPP4R3AQ6IN85 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.19■■□□□ 1.62
PPP4R3AQ6IN85 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PPP4R3AQ6IN85 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.19■■□□□ 1.62
PPP4R3AQ6IN85 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PPP4R3AQ6IN85 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
PPP4R3AQ6IN85 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.18■■□□□ 1.62
PPP4R3AQ6IN85 AC133637.1-201ENST00000624115 1537 ntBASIC25.18■■□□□ 1.62
PPP4R3AQ6IN85 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PPP4R3AQ6IN85 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
PPP4R3AQ6IN85 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PPP4R3AQ6IN85 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PPP4R3AQ6IN85 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms