Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LRRK2Q5S007 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRK2Q5S007 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRK2Q5S007 SMUG1P1-201ENST00000590640 811 ntBASIC19.63■□□□□ 0.73
LRRK2Q5S007 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LRRK2Q5S007 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.63■□□□□ 0.73
LRRK2Q5S007 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRK2Q5S007 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRK2Q5S007 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRK2Q5S007 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.62■□□□□ 0.73
LRRK2Q5S007 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LRRK2Q5S007 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRK2Q5S007 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.62■□□□□ 0.73
LRRK2Q5S007 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.62■□□□□ 0.73
LRRK2Q5S007 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRK2Q5S007 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.62■□□□□ 0.73
LRRK2Q5S007 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LRRK2Q5S007 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRK2Q5S007 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRK2Q5S007 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRK2Q5S007 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRK2Q5S007 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRK2Q5S007 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRK2Q5S007 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LRRK2Q5S007 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRK2Q5S007 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LRRK2Q5S007 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRK2Q5S007 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRK2Q5S007 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRK2Q5S007 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRK2Q5S007 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRK2Q5S007 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRK2Q5S007 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.61■□□□□ 0.73
LRRK2Q5S007 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.61■□□□□ 0.73
LRRK2Q5S007 DUX4L16-201ENST00000555130 1264 ntBASIC19.61■□□□□ 0.73
LRRK2Q5S007 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRK2Q5S007 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRK2Q5S007 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LRRK2Q5S007 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRK2Q5S007 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.6■□□□□ 0.73
LRRK2Q5S007 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRK2Q5S007 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRK2Q5S007 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRK2Q5S007 BX005040.4-201ENST00000637145 1518 ntBASIC19.6■□□□□ 0.73
LRRK2Q5S007 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.6■□□□□ 0.73
LRRK2Q5S007 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRK2Q5S007 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRK2Q5S007 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LRRK2Q5S007 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.59■□□□□ 0.73
LRRK2Q5S007 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRK2Q5S007 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRK2Q5S007 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LRRK2Q5S007 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.59■□□□□ 0.73
LRRK2Q5S007 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRK2Q5S007 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRK2Q5S007 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.59■□□□□ 0.73
LRRK2Q5S007 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRK2Q5S007 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LRRK2Q5S007 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRK2Q5S007 AL121832.2-201ENST00000610979 668 ntBASIC19.59■□□□□ 0.73
LRRK2Q5S007 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRK2Q5S007 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.58■□□□□ 0.73
LRRK2Q5S007 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRRK2Q5S007 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.58■□□□□ 0.73
LRRK2Q5S007 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.58■□□□□ 0.73
LRRK2Q5S007 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
LRRK2Q5S007 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRK2Q5S007 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRRK2Q5S007 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
LRRK2Q5S007 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRK2Q5S007 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRK2Q5S007 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
LRRK2Q5S007 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.57■□□□□ 0.72
LRRK2Q5S007 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LRRK2Q5S007 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRK2Q5S007 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRK2Q5S007 AL596275.1-201ENST00000423464 877 ntBASIC19.57■□□□□ 0.72
LRRK2Q5S007 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRK2Q5S007 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.57■□□□□ 0.72
LRRK2Q5S007 SLC7A5P1-201ENST00000568957 537 ntBASIC19.57■□□□□ 0.72
LRRK2Q5S007 AC092118.2-201ENST00000613495 667 ntBASIC19.57■□□□□ 0.72
LRRK2Q5S007 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRK2Q5S007 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRK2Q5S007 CNN2P6-201ENST00000439038 900 ntBASIC19.56■□□□□ 0.72
LRRK2Q5S007 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
LRRK2Q5S007 RNA5SP413-201ENST00000516373 109 ntBASIC19.56■□□□□ 0.72
LRRK2Q5S007 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRK2Q5S007 AP006294.2-201ENST00000641667 209 ntBASIC19.56■□□□□ 0.72
LRRK2Q5S007 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRK2Q5S007 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRK2Q5S007 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRK2Q5S007 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.56■□□□□ 0.72
LRRK2Q5S007 DUSP5P2-201ENST00000426873 1033 ntBASIC19.56■□□□□ 0.72
LRRK2Q5S007 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRK2Q5S007 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.56■□□□□ 0.72
LRRK2Q5S007 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.56■□□□□ 0.72
LRRK2Q5S007 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LRRK2Q5S007 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRK2Q5S007 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRK2Q5S007 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms