Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SGO1Q5FBB7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SGO1Q5FBB7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SGO1Q5FBB7 TSPY9P-201ENST00000440215 945 ntBASIC21.53■■□□□ 1.04
SGO1Q5FBB7 TSPY11P-201ENST00000442607 1045 ntBASIC21.53■■□□□ 1.04
SGO1Q5FBB7 AC009299.2-201ENST00000482477 511 ntBASIC21.53■■□□□ 1.04
SGO1Q5FBB7 AL451085.2-201ENST00000605085 799 ntBASIC21.53■■□□□ 1.04
SGO1Q5FBB7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.53■■□□□ 1.04
SGO1Q5FBB7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SGO1Q5FBB7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SGO1Q5FBB7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SGO1Q5FBB7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SGO1Q5FBB7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.52■■□□□ 1.04
SGO1Q5FBB7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SGO1Q5FBB7 Z92544.1-202ENST00000571933 1220 ntBASIC21.52■■□□□ 1.04
SGO1Q5FBB7 MTDHP2-201ENST00000601468 714 ntBASIC21.52■■□□□ 1.04
SGO1Q5FBB7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SGO1Q5FBB7 AC079834.2-201ENST00000609776 1949 ntBASIC21.52■■□□□ 1.04
SGO1Q5FBB7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SGO1Q5FBB7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SGO1Q5FBB7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.52■■□□□ 1.03
SGO1Q5FBB7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
SGO1Q5FBB7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
SGO1Q5FBB7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SGO1Q5FBB7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SGO1Q5FBB7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.51■■□□□ 1.03
SGO1Q5FBB7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.51■■□□□ 1.03
SGO1Q5FBB7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.51■■□□□ 1.03
SGO1Q5FBB7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.51■■□□□ 1.03
SGO1Q5FBB7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.51■■□□□ 1.03
SGO1Q5FBB7 AC144652.1-201ENST00000609974 1624 ntBASIC21.51■■□□□ 1.03
SGO1Q5FBB7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SGO1Q5FBB7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
SGO1Q5FBB7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SGO1Q5FBB7 EP400NL-214ENST00000641289 2402 ntBASIC21.5■■□□□ 1.03
SGO1Q5FBB7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SGO1Q5FBB7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.5■■□□□ 1.03
SGO1Q5FBB7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SGO1Q5FBB7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SGO1Q5FBB7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SGO1Q5FBB7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SGO1Q5FBB7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SGO1Q5FBB7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SGO1Q5FBB7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SGO1Q5FBB7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SGO1Q5FBB7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.5■■□□□ 1.03
SGO1Q5FBB7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.49■■□□□ 1.03
SGO1Q5FBB7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.48■■□□□ 1.03
SGO1Q5FBB7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SGO1Q5FBB7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.48■■□□□ 1.03
SGO1Q5FBB7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SGO1Q5FBB7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SGO1Q5FBB7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SGO1Q5FBB7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SGO1Q5FBB7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SGO1Q5FBB7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SGO1Q5FBB7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SGO1Q5FBB7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SGO1Q5FBB7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SGO1Q5FBB7 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.47■■□□□ 1.03
SGO1Q5FBB7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
SGO1Q5FBB7 AC010997.5-201ENST00000609182 354 ntBASIC21.47■■□□□ 1.03
SGO1Q5FBB7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SGO1Q5FBB7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SGO1Q5FBB7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SGO1Q5FBB7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SGO1Q5FBB7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SGO1Q5FBB7 GUSBP5-202ENST00000510805 1989 ntBASIC21.47■■□□□ 1.03
SGO1Q5FBB7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SGO1Q5FBB7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.46■■□□□ 1.03
SGO1Q5FBB7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.46■■□□□ 1.03
SGO1Q5FBB7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SGO1Q5FBB7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SGO1Q5FBB7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.46■■□□□ 1.03
SGO1Q5FBB7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SGO1Q5FBB7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SGO1Q5FBB7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.46■■□□□ 1.03
SGO1Q5FBB7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SGO1Q5FBB7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SGO1Q5FBB7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SGO1Q5FBB7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SGO1Q5FBB7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.46■■□□□ 1.03
SGO1Q5FBB7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms