Protein–RNA interactions for Protein: Q495N2

SLC36A3, Proton-coupled amino acid transporter 3, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC36A3Q495N2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC36A3Q495N2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC36A3Q495N2 AL022069.1-201ENST00000568025 1636 ntBASIC20.68■□□□□ 0.9
SLC36A3Q495N2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC36A3Q495N2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SLC36A3Q495N2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC36A3Q495N2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SLC36A3Q495N2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SLC36A3Q495N2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC36A3Q495N2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC36A3Q495N2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC36A3Q495N2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
SLC36A3Q495N2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC36A3Q495N2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC36A3Q495N2 AC080038.3-201ENST00000623346 1952 ntBASIC20.67■□□□□ 0.9
SLC36A3Q495N2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.67■□□□□ 0.9
SLC36A3Q495N2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC36A3Q495N2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SLC36A3Q495N2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SLC36A3Q495N2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC36A3Q495N2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SLC36A3Q495N2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SLC36A3Q495N2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC36A3Q495N2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SLC36A3Q495N2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC36A3Q495N2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SLC36A3Q495N2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.66■□□□□ 0.9
SLC36A3Q495N2 MIR6765-201ENST00000614092 87 ntBASIC20.66■□□□□ 0.9
SLC36A3Q495N2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC36A3Q495N2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC36A3Q495N2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC36A3Q495N2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC36A3Q495N2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SLC36A3Q495N2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC36A3Q495N2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC36A3Q495N2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC36A3Q495N2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC36A3Q495N2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC36A3Q495N2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC36A3Q495N2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SLC36A3Q495N2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SLC36A3Q495N2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC36A3Q495N2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC36A3Q495N2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC36A3Q495N2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
SLC36A3Q495N2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SLC36A3Q495N2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC36A3Q495N2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC36A3Q495N2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.64■□□□□ 0.89
SLC36A3Q495N2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC36A3Q495N2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC36A3Q495N2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC36A3Q495N2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC36A3Q495N2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC36A3Q495N2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC36A3Q495N2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC36A3Q495N2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC36A3Q495N2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC36A3Q495N2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SLC36A3Q495N2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC36A3Q495N2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC36A3Q495N2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC36A3Q495N2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.63■□□□□ 0.89
SLC36A3Q495N2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC36A3Q495N2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC36A3Q495N2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC36A3Q495N2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC36A3Q495N2 AL121603.2-201ENST00000557373 2117 ntBASIC20.63■□□□□ 0.89
SLC36A3Q495N2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC36A3Q495N2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC36A3Q495N2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC36A3Q495N2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC36A3Q495N2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC36A3Q495N2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC36A3Q495N2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC36A3Q495N2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC36A3Q495N2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC36A3Q495N2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
SLC36A3Q495N2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC36A3Q495N2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC36A3Q495N2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC36A3Q495N2 ALDH1A3-203ENST00000557963 1670 ntBASIC20.61■□□□□ 0.89
SLC36A3Q495N2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC36A3Q495N2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC36A3Q495N2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms