Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 GUSBP5-202ENST00000510805 1989 ntBASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 DUSP8P3-201ENST00000399571 1760 ntBASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.56■□□□□ 0.72
PCGF3Q3KNV8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PCGF3Q3KNV8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PCGF3Q3KNV8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.55■□□□□ 0.72
PCGF3Q3KNV8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.55■□□□□ 0.72
PCGF3Q3KNV8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCGF3Q3KNV8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.55■□□□□ 0.72
PCGF3Q3KNV8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCGF3Q3KNV8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCGF3Q3KNV8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.55■□□□□ 0.72
PCGF3Q3KNV8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.55■□□□□ 0.72
PCGF3Q3KNV8 AL356740.2-201ENST00000601559 647 ntBASIC19.55■□□□□ 0.72
PCGF3Q3KNV8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCGF3Q3KNV8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCGF3Q3KNV8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCGF3Q3KNV8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.54■□□□□ 0.72
PCGF3Q3KNV8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.54■□□□□ 0.72
PCGF3Q3KNV8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCGF3Q3KNV8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCGF3Q3KNV8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCGF3Q3KNV8 AC127496.7-201ENST00000625110 1798 ntBASIC19.54■□□□□ 0.72
PCGF3Q3KNV8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCGF3Q3KNV8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.54■□□□□ 0.72
PCGF3Q3KNV8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCGF3Q3KNV8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCGF3Q3KNV8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCGF3Q3KNV8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCGF3Q3KNV8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.53■□□□□ 0.72
PCGF3Q3KNV8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.53■□□□□ 0.72
PCGF3Q3KNV8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCGF3Q3KNV8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.53■□□□□ 0.72
PCGF3Q3KNV8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCGF3Q3KNV8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCGF3Q3KNV8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PCGF3Q3KNV8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.53■□□□□ 0.72
PCGF3Q3KNV8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCGF3Q3KNV8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.53■□□□□ 0.72
PCGF3Q3KNV8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCGF3Q3KNV8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCGF3Q3KNV8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
PCGF3Q3KNV8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCGF3Q3KNV8 AC131274.2-201ENST00000580697 1507 ntBASIC19.52■□□□□ 0.72
PCGF3Q3KNV8 AC092068.2-201ENST00000590491 1708 ntBASIC19.52■□□□□ 0.72
PCGF3Q3KNV8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCGF3Q3KNV8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCGF3Q3KNV8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.52■□□□□ 0.72
PCGF3Q3KNV8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCGF3Q3KNV8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCGF3Q3KNV8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCGF3Q3KNV8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.52■□□□□ 0.71
PCGF3Q3KNV8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCGF3Q3KNV8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCGF3Q3KNV8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 MIR3621-201ENST00000580529 85 ntBASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 AL117332.1-201ENST00000622628 974 ntBASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCGF3Q3KNV8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 AC137767.1-201ENST00000602918 1920 ntBASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms