Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1AQ02539 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1AQ02539 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1AQ02539 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST1H1AQ02539 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1AQ02539 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HIST1H1AQ02539 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1AQ02539 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1AQ02539 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1AQ02539 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST1H1AQ02539 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.9■□□□□ 0.3
HIST1H1AQ02539 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1AQ02539 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
HIST1H1AQ02539 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1AQ02539 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HIST1H1AQ02539 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HIST1H1AQ02539 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HIST1H1AQ02539 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HIST1H1AQ02539 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HIST1H1AQ02539 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H1AQ02539 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H1AQ02539 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.89■□□□□ 0.29
HIST1H1AQ02539 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.89■□□□□ 0.29
HIST1H1AQ02539 AC004448.1-201ENST00000458332 883 ntBASIC16.89■□□□□ 0.29
HIST1H1AQ02539 AC103834.1-201ENST00000520383 144 ntBASIC16.89■□□□□ 0.29
HIST1H1AQ02539 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H1AQ02539 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.89■□□□□ 0.29
HIST1H1AQ02539 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HIST1H1AQ02539 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H1AQ02539 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H1AQ02539 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.89■□□□□ 0.29
HIST1H1AQ02539 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H1AQ02539 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HIST1H1AQ02539 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1AQ02539 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1AQ02539 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1AQ02539 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1AQ02539 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HIST1H1AQ02539 AC103724.3-201ENST00000564481 992 ntBASIC16.88■□□□□ 0.29
HIST1H1AQ02539 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HIST1H1AQ02539 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HIST1H1AQ02539 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.88■□□□□ 0.29
HIST1H1AQ02539 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1AQ02539 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1AQ02539 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1AQ02539 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 AL031848.2-201ENST00000607670 837 ntBASIC16.87■□□□□ 0.29
HIST1H1AQ02539 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1AQ02539 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H1AQ02539 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H1AQ02539 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H1AQ02539 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H1AQ02539 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H1AQ02539 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.86■□□□□ 0.29
HIST1H1AQ02539 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.86■□□□□ 0.29
HIST1H1AQ02539 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H1AQ02539 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HIST1H1AQ02539 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST1H1AQ02539 EP400NL-214ENST00000641289 2402 ntBASIC16.86■□□□□ 0.29
HIST1H1AQ02539 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIST1H1AQ02539 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms