Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.4■■□□□ 1.02
HMGCS1Q01581 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
HMGCS1Q01581 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
HMGCS1Q01581 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCS1Q01581 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
HMGCS1Q01581 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.39■■□□□ 1.02
HMGCS1Q01581 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
HMGCS1Q01581 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HMGCS1Q01581 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
HMGCS1Q01581 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
HMGCS1Q01581 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
HMGCS1Q01581 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.39■■□□□ 1.01
HMGCS1Q01581 Z92544.1-202ENST00000571933 1220 ntBASIC21.39■■□□□ 1.01
HMGCS1Q01581 MIR4787-201ENST00000607364 84 ntBASIC21.39■■□□□ 1.01
HMGCS1Q01581 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
HMGCS1Q01581 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCS1Q01581 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.38■■□□□ 1.01
HMGCS1Q01581 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.38■■□□□ 1.01
HMGCS1Q01581 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCS1Q01581 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCS1Q01581 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HMGCS1Q01581 AC239859.2-201ENST00000444165 318 ntBASIC21.38■■□□□ 1.01
HMGCS1Q01581 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.38■■□□□ 1.01
HMGCS1Q01581 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCS1Q01581 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCS1Q01581 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCS1Q01581 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCS1Q01581 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.38■■□□□ 1.01
HMGCS1Q01581 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCS1Q01581 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCS1Q01581 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.37■■□□□ 1.01
HMGCS1Q01581 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCS1Q01581 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCS1Q01581 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.37■■□□□ 1.01
HMGCS1Q01581 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.37■■□□□ 1.01
HMGCS1Q01581 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.37■■□□□ 1.01
HMGCS1Q01581 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCS1Q01581 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCS1Q01581 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCS1Q01581 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCS1Q01581 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCS1Q01581 AC009299.2-201ENST00000482477 511 ntBASIC21.37■■□□□ 1.01
HMGCS1Q01581 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCS1Q01581 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
HMGCS1Q01581 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCS1Q01581 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
HMGCS1Q01581 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCS1Q01581 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.37■■□□□ 1.01
HMGCS1Q01581 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.37■■□□□ 1.01
HMGCS1Q01581 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCS1Q01581 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCS1Q01581 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
HMGCS1Q01581 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.36■■□□□ 1.01
HMGCS1Q01581 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
HMGCS1Q01581 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.36■■□□□ 1.01
HMGCS1Q01581 MTDHP2-201ENST00000601468 714 ntBASIC21.36■■□□□ 1.01
HMGCS1Q01581 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCS1Q01581 LINC00526-201ENST00000581067 1875 ntBASIC21.36■■□□□ 1.01
HMGCS1Q01581 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
HMGCS1Q01581 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCS1Q01581 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCS1Q01581 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.35■■□□□ 1.01
HMGCS1Q01581 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCS1Q01581 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCS1Q01581 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCS1Q01581 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCS1Q01581 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCS1Q01581 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
HMGCS1Q01581 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.35■■□□□ 1.01
HMGCS1Q01581 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCS1Q01581 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCS1Q01581 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
HMGCS1Q01581 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCS1Q01581 ECEL1P1-201ENST00000373592 1742 ntBASIC21.35■■□□□ 1.01
HMGCS1Q01581 LINC01529-204ENST00000636474 1715 ntBASIC21.35■■□□□ 1.01
HMGCS1Q01581 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCS1Q01581 ESRRAP2-201ENST00000418437 1549 ntBASIC21.34■■□□□ 1.01
HMGCS1Q01581 LINC00565-201ENST00000562710 2331 ntBASIC21.34■■□□□ 1.01
HMGCS1Q01581 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCS1Q01581 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCS1Q01581 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
HMGCS1Q01581 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCS1Q01581 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.34■■□□□ 1.01
HMGCS1Q01581 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.34■■□□□ 1.01
HMGCS1Q01581 TSPY9P-201ENST00000440215 945 ntBASIC21.34■■□□□ 1.01
HMGCS1Q01581 TSPY11P-201ENST00000442607 1045 ntBASIC21.34■■□□□ 1.01
HMGCS1Q01581 AL035685.1-201ENST00000636663 812 ntBASIC21.34■■□□□ 1.01
HMGCS1Q01581 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCS1Q01581 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCS1Q01581 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCS1Q01581 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HMGCS1Q01581 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HMGCS1Q01581 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
HMGCS1Q01581 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.33■■□□□ 1
HMGCS1Q01581 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
HMGCS1Q01581 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HMGCS1Q01581 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
HMGCS1Q01581 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HMGCS1Q01581 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.32■■□□□ 1
HMGCS1Q01581 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms