Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4XP62701 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4XP62701 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RPS4XP62701 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.1■□□□□ 0.81
RPS4XP62701 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RPS4XP62701 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4XP62701 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4XP62701 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.1■□□□□ 0.81
RPS4XP62701 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.1■□□□□ 0.81
RPS4XP62701 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RPS4XP62701 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4XP62701 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4XP62701 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RPS4XP62701 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4XP62701 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.1■□□□□ 0.81
RPS4XP62701 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4XP62701 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4XP62701 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.09■□□□□ 0.81
RPS4XP62701 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4XP62701 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.09■□□□□ 0.81
RPS4XP62701 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RPS4XP62701 GUSBP5-202ENST00000510805 1989 ntBASIC20.09■□□□□ 0.81
RPS4XP62701 AL136116.3-201ENST00000402907 1138 ntBASIC20.09■□□□□ 0.81
RPS4XP62701 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4XP62701 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.09■□□□□ 0.81
RPS4XP62701 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.09■□□□□ 0.81
RPS4XP62701 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4XP62701 AL356740.2-201ENST00000601559 647 ntBASIC20.09■□□□□ 0.81
RPS4XP62701 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.09■□□□□ 0.81
RPS4XP62701 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4XP62701 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4XP62701 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4XP62701 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4XP62701 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4XP62701 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4XP62701 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4XP62701 ESRRAP2-201ENST00000418437 1549 ntBASIC20.08■□□□□ 0.81
RPS4XP62701 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.08■□□□□ 0.81
RPS4XP62701 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.08■□□□□ 0.81
RPS4XP62701 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4XP62701 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.08■□□□□ 0.81
RPS4XP62701 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4XP62701 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.08■□□□□ 0.81
RPS4XP62701 AL139246.5-201ENST00000606645 996 ntBASIC20.08■□□□□ 0.81
RPS4XP62701 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.08■□□□□ 0.81
RPS4XP62701 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPS4XP62701 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPS4XP62701 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.07■□□□□ 0.8
RPS4XP62701 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.07■□□□□ 0.8
RPS4XP62701 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4XP62701 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.07■□□□□ 0.8
RPS4XP62701 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4XP62701 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.07■□□□□ 0.8
RPS4XP62701 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4XP62701 MIR3621-201ENST00000580529 85 ntBASIC20.07■□□□□ 0.8
RPS4XP62701 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4XP62701 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4XP62701 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4XP62701 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RPS4XP62701 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4XP62701 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4XP62701 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RPS4XP62701 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPS4XP62701 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.06■□□□□ 0.8
RPS4XP62701 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPS4XP62701 MIR638-201ENST00000385237 100 ntBASIC20.06■□□□□ 0.8
RPS4XP62701 MIR935-201ENST00000401179 91 ntBASIC20.06■□□□□ 0.8
RPS4XP62701 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.06■□□□□ 0.8
RPS4XP62701 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPS4XP62701 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RPS4XP62701 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4XP62701 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4XP62701 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.05■□□□□ 0.8
RPS4XP62701 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.05■□□□□ 0.8
RPS4XP62701 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RPS4XP62701 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.05■□□□□ 0.8
RPS4XP62701 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4XP62701 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RPS4XP62701 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4XP62701 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.04■□□□□ 0.8
RPS4XP62701 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.04■□□□□ 0.8
RPS4XP62701 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4XP62701 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4XP62701 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.04■□□□□ 0.8
RPS4XP62701 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.04■□□□□ 0.8
RPS4XP62701 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.04■□□□□ 0.8
RPS4XP62701 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4XP62701 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.04■□□□□ 0.8
RPS4XP62701 ECEL1P1-201ENST00000373592 1742 ntBASIC20.04■□□□□ 0.8
RPS4XP62701 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4XP62701 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4XP62701 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RPS4XP62701 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RPS4XP62701 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4XP62701 AC127496.7-201ENST00000625110 1798 ntBASIC20.03■□□□□ 0.8
RPS4XP62701 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4XP62701 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4XP62701 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RPS4XP62701 EP400NL-214ENST00000641289 2402 ntBASIC20.03■□□□□ 0.8
RPS4XP62701 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms