Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC30.11■■■□□ 2.41
ZC3H6P61129 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
ZC3H6P61129 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC30.11■■■□□ 2.41
ZC3H6P61129 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
ZC3H6P61129 STX7-201ENST00000367937 1090 ntTSL 5 BASIC30.1■■■□□ 2.41
ZC3H6P61129 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ZC3H6P61129 FP325331.1-202ENST00000623531 1380 ntBASIC30.1■■■□□ 2.41
ZC3H6P61129 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
ZC3H6P61129 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC30.1■■■□□ 2.41
ZC3H6P61129 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
ZC3H6P61129 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
ZC3H6P61129 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
ZC3H6P61129 EMC9-206ENST00000560403 872 ntTSL 2 BASIC30.09■■■□□ 2.41
ZC3H6P61129 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC30.09■■■□□ 2.41
ZC3H6P61129 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
ZC3H6P61129 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
ZC3H6P61129 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ZC3H6P61129 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
ZC3H6P61129 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
ZC3H6P61129 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
ZC3H6P61129 DBI-210ENST00000542275 757 ntTSL 5 BASIC30.08■■■□□ 2.41
ZC3H6P61129 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.41
ZC3H6P61129 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
ZC3H6P61129 MAP2K4P1-201ENST00000438453 1195 ntBASIC30.07■■■□□ 2.4
ZC3H6P61129 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC30.07■■■□□ 2.4
ZC3H6P61129 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC30.07■■■□□ 2.4
ZC3H6P61129 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
ZC3H6P61129 STX4-202ENST00000394998 1498 ntTSL 2 BASIC30.06■■■□□ 2.4
ZC3H6P61129 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC30.06■■■□□ 2.4
ZC3H6P61129 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC30.06■■■□□ 2.4
ZC3H6P61129 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
ZC3H6P61129 PPP1R14BP3-201ENST00000509033 445 ntBASIC30.06■■■□□ 2.4
ZC3H6P61129 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC30.06■■■□□ 2.4
ZC3H6P61129 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC30.06■■■□□ 2.4
ZC3H6P61129 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC30.06■■■□□ 2.4
ZC3H6P61129 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC30.06■■■□□ 2.4
ZC3H6P61129 TPRG1LP1-201ENST00000598702 760 ntBASIC30.06■■■□□ 2.4
ZC3H6P61129 AC104771.1-201ENST00000603335 964 ntBASIC30.06■■■□□ 2.4
ZC3H6P61129 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ZC3H6P61129 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
ZC3H6P61129 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.06■■■□□ 2.4
ZC3H6P61129 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
ZC3H6P61129 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
ZC3H6P61129 AP004607.4-201ENST00000530158 1459 ntBASIC30.06■■■□□ 2.4
ZC3H6P61129 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
ZC3H6P61129 HSCB-202ENST00000398941 955 ntTSL 2 BASIC30.05■■■□□ 2.4
ZC3H6P61129 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC30.05■■■□□ 2.4
ZC3H6P61129 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC30.05■■■□□ 2.4
ZC3H6P61129 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC30.05■■■□□ 2.4
ZC3H6P61129 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ZC3H6P61129 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
ZC3H6P61129 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ZC3H6P61129 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ZC3H6P61129 COX20-201ENST00000366528 568 ntTSL 2 BASIC30.04■■■□□ 2.4
ZC3H6P61129 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ZC3H6P61129 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ZC3H6P61129 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC30.04■■■□□ 2.4
ZC3H6P61129 AC026185.1-201ENST00000445748 174 ntBASIC30.04■■■□□ 2.4
ZC3H6P61129 AC004854.2-201ENST00000608450 1441 ntBASIC30.04■■■□□ 2.4
ZC3H6P61129 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC30.04■■■□□ 2.4
ZC3H6P61129 RARA-203ENST00000394086 2008 ntTSL 2 BASIC30.03■■■□□ 2.4
ZC3H6P61129 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
ZC3H6P61129 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
ZC3H6P61129 MFF-208ENST00000409616 1247 ntTSL 5 BASIC30.03■■■□□ 2.4
ZC3H6P61129 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC30.03■■■□□ 2.4
ZC3H6P61129 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
ZC3H6P61129 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
ZC3H6P61129 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
ZC3H6P61129 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC30.03■■■□□ 2.4
ZC3H6P61129 SHD-204ENST00000599689 1729 ntTSL 5 BASIC30.02■■■□□ 2.4
ZC3H6P61129 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC30.02■■■□□ 2.4
ZC3H6P61129 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ZC3H6P61129 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
ZC3H6P61129 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC30.02■■■□□ 2.4
ZC3H6P61129 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC30.02■■■□□ 2.4
ZC3H6P61129 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC30.02■■■□□ 2.4
ZC3H6P61129 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC30.02■■■□□ 2.4
ZC3H6P61129 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
ZC3H6P61129 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
ZC3H6P61129 ABHD17AP1-201ENST00000358206 933 ntBASIC30.01■■■□□ 2.39
ZC3H6P61129 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC30.01■■■□□ 2.39
ZC3H6P61129 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC30.01■■■□□ 2.39
ZC3H6P61129 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
ZC3H6P61129 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC30.01■■■□□ 2.39
ZC3H6P61129 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC30.01■■■□□ 2.39
ZC3H6P61129 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ZC3H6P61129 GAS2L1P2-201ENST00000436355 1356 ntBASIC30.01■■■□□ 2.39
ZC3H6P61129 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
ZC3H6P61129 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC30■■■□□ 2.39
ZC3H6P61129 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
ZC3H6P61129 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC30■■■□□ 2.39
ZC3H6P61129 CROCCP5-201ENST00000436658 830 ntBASIC30■■■□□ 2.39
ZC3H6P61129 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC30■■■□□ 2.39
ZC3H6P61129 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC30■■■□□ 2.39
ZC3H6P61129 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
ZC3H6P61129 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
ZC3H6P61129 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
ZC3H6P61129 LINC01529-204ENST00000636474 1715 ntBASIC29.99■■■□□ 2.39
ZC3H6P61129 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
ZC3H6P61129 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms