Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.46■■□□□ 1.03
CLDN6P56747 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.46■■□□□ 1.03
CLDN6P56747 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN6P56747 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CLDN6P56747 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN6P56747 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN6P56747 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.46■■□□□ 1.03
CLDN6P56747 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN6P56747 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN6P56747 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.45■■□□□ 1.03
CLDN6P56747 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.45■■□□□ 1.03
CLDN6P56747 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.45■■□□□ 1.03
CLDN6P56747 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN6P56747 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN6P56747 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN6P56747 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN6P56747 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN6P56747 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
CLDN6P56747 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CLDN6P56747 AC105233.4-201ENST00000642045 216 ntBASIC21.45■■□□□ 1.02
CLDN6P56747 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.45■■□□□ 1.02
CLDN6P56747 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN6P56747 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CLDN6P56747 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN6P56747 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.44■■□□□ 1.02
CLDN6P56747 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.44■■□□□ 1.02
CLDN6P56747 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.44■■□□□ 1.02
CLDN6P56747 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN6P56747 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CLDN6P56747 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
CLDN6P56747 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN6P56747 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN6P56747 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CLDN6P56747 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN6P56747 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.43■■□□□ 1.02
CLDN6P56747 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN6P56747 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN6P56747 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN6P56747 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN6P56747 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN6P56747 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CLDN6P56747 CDCA4P2-201ENST00000441182 718 ntBASIC21.43■■□□□ 1.02
CLDN6P56747 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN6P56747 OR2I1P-207ENST00000453522 948 ntBASIC21.43■■□□□ 1.02
CLDN6P56747 RAP2CP1-201ENST00000605103 478 ntBASIC21.43■■□□□ 1.02
CLDN6P56747 AL499627.2-201ENST00000606283 725 ntBASIC21.43■■□□□ 1.02
CLDN6P56747 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.43■■□□□ 1.02
CLDN6P56747 AL161729.1-201ENST00000604104 1402 ntBASIC21.43■■□□□ 1.02
CLDN6P56747 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.43■■□□□ 1.02
CLDN6P56747 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN6P56747 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.42■■□□□ 1.02
CLDN6P56747 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.42■■□□□ 1.02
CLDN6P56747 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN6P56747 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CLDN6P56747 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.42■■□□□ 1.02
CLDN6P56747 AC073111.5-205ENST00000641717 521 ntBASIC21.42■■□□□ 1.02
CLDN6P56747 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN6P56747 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN6P56747 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN6P56747 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.41■■□□□ 1.02
CLDN6P56747 AC137761.2-201ENST00000561729 223 ntBASIC21.41■■□□□ 1.02
CLDN6P56747 AC145350.3-201ENST00000569033 163 ntBASIC21.41■■□□□ 1.02
CLDN6P56747 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.41■■□□□ 1.02
CLDN6P56747 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.41■■□□□ 1.02
CLDN6P56747 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN6P56747 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN6P56747 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CLDN6P56747 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN6P56747 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.4■■□□□ 1.02
CLDN6P56747 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN6P56747 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN6P56747 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CLDN6P56747 AC006015.1-201ENST00000429970 570 ntBASIC21.4■■□□□ 1.02
CLDN6P56747 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.4■■□□□ 1.02
CLDN6P56747 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.4■■□□□ 1.02
CLDN6P56747 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.4■■□□□ 1.02
CLDN6P56747 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.4■■□□□ 1.02
CLDN6P56747 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN6P56747 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CLDN6P56747 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.39■■□□□ 1.02
CLDN6P56747 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLDN6P56747 AC016769.1-201ENST00000409132 1010 ntBASIC21.39■■□□□ 1.01
CLDN6P56747 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.39■■□□□ 1.01
CLDN6P56747 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.39■■□□□ 1.01
CLDN6P56747 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLDN6P56747 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLDN6P56747 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CLDN6P56747 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLDN6P56747 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN6P56747 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN6P56747 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CLDN6P56747 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN6P56747 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN6P56747 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN6P56747 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN6P56747 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CLDN6P56747 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN6P56747 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN6P56747 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CLDN6P56747 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms