Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
FOXG1P55316 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXG1P55316 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
FOXG1P55316 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXG1P55316 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXG1P55316 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXG1P55316 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
FOXG1P55316 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXG1P55316 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
FOXG1P55316 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
FOXG1P55316 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXG1P55316 AC133637.1-201ENST00000624115 1537 ntBASIC19.56■□□□□ 0.72
FOXG1P55316 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
FOXG1P55316 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXG1P55316 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXG1P55316 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
FOXG1P55316 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
FOXG1P55316 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXG1P55316 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.55■□□□□ 0.72
FOXG1P55316 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXG1P55316 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.55■□□□□ 0.72
FOXG1P55316 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXG1P55316 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXG1P55316 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXG1P55316 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXG1P55316 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXG1P55316 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXG1P55316 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXG1P55316 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXG1P55316 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXG1P55316 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXG1P55316 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXG1P55316 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXG1P55316 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXG1P55316 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXG1P55316 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
FOXG1P55316 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXG1P55316 AC136469.2-201ENST00000623944 1028 ntBASIC19.54■□□□□ 0.72
FOXG1P55316 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXG1P55316 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
FOXG1P55316 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXG1P55316 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXG1P55316 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXG1P55316 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.53■□□□□ 0.72
FOXG1P55316 SUDS3P1-201ENST00000505831 966 ntBASIC19.53■□□□□ 0.72
FOXG1P55316 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXG1P55316 AC133561.4-201ENST00000566112 224 ntBASIC19.53■□□□□ 0.72
FOXG1P55316 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXG1P55316 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.53■□□□□ 0.72
FOXG1P55316 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXG1P55316 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXG1P55316 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXG1P55316 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXG1P55316 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
FOXG1P55316 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXG1P55316 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.52■□□□□ 0.72
FOXG1P55316 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXG1P55316 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXG1P55316 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXG1P55316 AP001330.3-201ENST00000520123 633 ntBASIC19.52■□□□□ 0.72
FOXG1P55316 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXG1P55316 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXG1P55316 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXG1P55316 AF213884.3-201ENST00000563833 479 ntBASIC19.52■□□□□ 0.72
FOXG1P55316 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.52■□□□□ 0.72
FOXG1P55316 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXG1P55316 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXG1P55316 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
FOXG1P55316 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
FOXG1P55316 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXG1P55316 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXG1P55316 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXG1P55316 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
FOXG1P55316 EDA-201ENST00000338901 1233 ntBASIC19.51■□□□□ 0.71
FOXG1P55316 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXG1P55316 AC010525.1-201ENST00000585559 441 ntBASIC19.51■□□□□ 0.71
FOXG1P55316 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXG1P55316 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXG1P55316 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.51■□□□□ 0.71
FOXG1P55316 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXG1P55316 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXG1P55316 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
FOXG1P55316 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXG1P55316 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXG1P55316 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXG1P55316 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXG1P55316 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXG1P55316 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXG1P55316 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXG1P55316 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXG1P55316 DUSP8P3-201ENST00000399571 1760 ntBASIC19.5■□□□□ 0.71
FOXG1P55316 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
FOXG1P55316 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.5■□□□□ 0.71
FOXG1P55316 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.5■□□□□ 0.71
FOXG1P55316 AL355001.2-201ENST00000620617 1191 ntBASIC19.5■□□□□ 0.71
FOXG1P55316 AL136967.2-201ENST00000623968 743 ntBASIC19.5■□□□□ 0.71
FOXG1P55316 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXG1P55316 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXG1P55316 AC004687.1-201ENST00000579003 1625 ntBASIC19.5■□□□□ 0.71
FOXG1P55316 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms