Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 YKR075CYKR075C 924 nt3.72□□□□□ -1.81
UFD1P53044 RPS0BYLR048W 759 nt3.72□□□□□ -1.81
UFD1P53044 ECM23YPL021W 564 nt3.72□□□□□ -1.81
UFD1P53044 REG2YBR050C 1017 nt3.72□□□□□ -1.81
UFD1P53044 PBN1YCL052C 1251 nt3.72□□□□□ -1.81
UFD1P53044 HER2YMR293C 1395 nt3.72□□□□□ -1.81
UFD1P53044 SSH4YKL124W 1740 nt3.72□□□□□ -1.81
UFD1P53044 RDH54YBR073W 2877 nt3.72□□□□□ -1.81
UFD1P53044 NOC2YOR206W 2133 nt3.71□□□□□ -1.81
UFD1P53044 FAR10YLR238W 1437 nt3.71□□□□□ -1.82
UFD1P53044 YIL001WYIL001W 1542 nt3.71□□□□□ -1.82
UFD1P53044 UBC1YDR177W 648 nt3.71□□□□□ -1.82
UFD1P53044 SPS19YNL202W 879 nt3.71□□□□□ -1.82
UFD1P53044 BRE4YDL231C 3378 nt3.71□□□□□ -1.82
UFD1P53044 IKS1YJL057C 2004 nt3.71□□□□□ -1.82
UFD1P53044 FKH1YIL131C 1455 nt3.71□□□□□ -1.82
UFD1P53044 JHD2YJR119C 2187 nt3.7□□□□□ -1.82
UFD1P53044 DEG1YFL001W 1329 nt3.7□□□□□ -1.82
UFD1P53044 EMP47YFL048C 1338 nt3.7□□□□□ -1.82
UFD1P53044 YPR003CYPR003C 2265 nt3.7□□□□□ -1.82
UFD1P53044 SAT4YCR008W 1812 nt3.7□□□□□ -1.82
UFD1P53044 GAL11YOL051W 3246 nt3.7□□□□□ -1.82
UFD1P53044 YDL094CYDL094C 510 nt3.7□□□□□ -1.82
UFD1P53044 THI13YDL244W 1023 nt3.7□□□□□ -1.82
UFD1P53044 YDR274CYDR274C 372 nt3.7□□□□□ -1.82
UFD1P53044 YGL262WYGL262W 528 nt3.7□□□□□ -1.82
UFD1P53044 THI11YJR156C 1023 nt3.7□□□□□ -1.82
UFD1P53044 SPC34YKR037C 888 nt3.7□□□□□ -1.82
UFD1P53044 IES3YLR052W 753 nt3.7□□□□□ -1.82
UFD1P53044 YLR364C-AYLR364C-A 123 nt3.7□□□□□ -1.82
UFD1P53044 PEP4YPL154C 1218 nt3.7□□□□□ -1.82
UFD1P53044 ICY2YPL250C 411 nt3.7□□□□□ -1.82
UFD1P53044 ISA2YPR067W 558 nt3.7□□□□□ -1.82
UFD1P53044 RAD57YDR004W 1383 nt3.7□□□□□ -1.82
UFD1P53044 ARG4YHR018C 1392 nt3.7□□□□□ -1.82
UFD1P53044 KIP3YGL216W 2418 nt3.7□□□□□ -1.82
UFD1P53044 BUD8YLR353W 1812 nt3.7□□□□□ -1.82
UFD1P53044 ERG4YGL012W 1422 nt3.7□□□□□ -1.82
UFD1P53044 ADP1YCR011C 3150 nt3.69□□□□□ -1.82
UFD1P53044 RPO21YDL140C 5202 nt3.69□□□□□ -1.82
UFD1P53044 DPH6YLR143W 2058 nt3.69□□□□□ -1.82
UFD1P53044 RPO31YOR116C 4383 nt3.69□□□□□ -1.82
UFD1P53044 DSD1YGL196W 1287 nt3.69□□□□□ -1.82
UFD1P53044 SOL4YGR248W 768 nt3.69□□□□□ -1.82
UFD1P53044 COX2Q0250 756 nt3.69□□□□□ -1.82
UFD1P53044 YIL171WYIL171W 330 nt3.69□□□□□ -1.82
UFD1P53044 IRC9YJL142C 393 nt3.69□□□□□ -1.82
UFD1P53044 CUS2YNL286W 858 nt3.69□□□□□ -1.82
UFD1P53044 YNG1YOR064C 660 nt3.69□□□□□ -1.82
UFD1P53044 FAA1YOR317W 2103 nt3.69□□□□□ -1.82
UFD1P53044 SRB6YBR253W 366 nt3.69□□□□□ -1.82
UFD1P53044 YCF1YDR135C 4548 nt3.69□□□□□ -1.82
UFD1P53044 NTH1YDR001C 2256 nt3.68□□□□□ -1.82
UFD1P53044 THI22YPR121W 1719 nt3.68□□□□□ -1.82
UFD1P53044 SPT3YDR392W 1014 nt3.68□□□□□ -1.82
UFD1P53044 RPL24AYGL031C 468 nt3.68□□□□□ -1.82
UFD1P53044 PRE9YGR135W 777 nt3.68□□□□□ -1.82
UFD1P53044 YNK1YKL067W 462 nt3.68□□□□□ -1.82
UFD1P53044 SKG1YKR100C 1068 nt3.68□□□□□ -1.82
UFD1P53044 YLR036CYLR036C 612 nt3.68□□□□□ -1.82
UFD1P53044 MRM1YOR201C 1239 nt3.68□□□□□ -1.82
UFD1P53044 IDI1YPL117C 867 nt3.68□□□□□ -1.82
UFD1P53044 YEH2YLR020C 1617 nt3.68□□□□□ -1.82
UFD1P53044 GPI10YGL142C 1851 nt3.68□□□□□ -1.82
UFD1P53044 MNL1YHR204W 2391 nt3.68□□□□□ -1.82
UFD1P53044 CTF18YMR078C 2226 nt3.67□□□□□ -1.82
UFD1P53044 VMA1YDL185W 3216 nt3.67□□□□□ -1.82
UFD1P53044 RIM4YHL024W 2142 nt3.67□□□□□ -1.82
UFD1P53044 RXT3YDL076C 885 nt3.67□□□□□ -1.82
UFD1P53044 RPS31YLR167W 459 nt3.67□□□□□ -1.82
UFD1P53044 NCE103YNL036W 666 nt3.67□□□□□ -1.82
UFD1P53044 TIF5YPR041W 1218 nt3.67□□□□□ -1.82
UFD1P53044 GAS4YOL132W 1416 nt3.67□□□□□ -1.82
UFD1P53044 FLO8YER109C 2400 nt3.66□□□□□ -1.82
UFD1P53044 TMN2YDR107C 2019 nt3.66□□□□□ -1.82
UFD1P53044 KRE5YOR336W 4098 nt3.66□□□□□ -1.82
UFD1P53044 NFI1YOR156C 2181 nt3.66□□□□□ -1.82
UFD1P53044 YER147C-AYER147C-A 411 nt3.66□□□□□ -1.82
UFD1P53044 COS4YFL062W 1140 nt3.66□□□□□ -1.82
UFD1P53044 YGL188CYGL188C 174 nt3.66□□□□□ -1.82
UFD1P53044 tQ(UUG)CtQ(UUG)C 72 nt3.66□□□□□ -1.82
UFD1P53044 tQ(UUG)D1tQ(UUG)D1 72 nt3.66□□□□□ -1.82
UFD1P53044 tQ(UUG)D2tQ(UUG)D2 72 nt3.66□□□□□ -1.82
UFD1P53044 tQ(UUG)D3tQ(UUG)D3 72 nt3.66□□□□□ -1.82
UFD1P53044 tQ(UUG)E1tQ(UUG)E1 72 nt3.66□□□□□ -1.82
UFD1P53044 tQ(UUG)HtQ(UUG)H 72 nt3.66□□□□□ -1.82
UFD1P53044 tQ(UUG)LtQ(UUG)L 72 nt3.66□□□□□ -1.82
UFD1P53044 PSR1YLL010C 1284 nt3.66□□□□□ -1.82
UFD1P53044 YLR407WYLR407W 687 nt3.66□□□□□ -1.82
UFD1P53044 COS3YML132W 1140 nt3.66□□□□□ -1.82
UFD1P53044 RRN9YMR270C 1098 nt3.66□□□□□ -1.82
UFD1P53044 DSE3YOR264W 1293 nt3.66□□□□□ -1.82
UFD1P53044 MFM1YPL060W 1242 nt3.66□□□□□ -1.82
UFD1P53044 COS2YBR302C 1140 nt3.66□□□□□ -1.82
UFD1P53044 ATG2YNL242W 4779 nt3.66□□□□□ -1.82
UFD1P53044 CEG1YGL130W 1380 nt3.65□□□□□ -1.82
UFD1P53044 LSB1YGR136W 726 nt3.65□□□□□ -1.83
UFD1P53044 NKP2YLR315W 462 nt3.65□□□□□ -1.83
UFD1P53044 SWC7YLR385C 399 nt3.65□□□□□ -1.83
UFD1P53044 YLR402WYLR402W 192 nt3.65□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms