Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB2P52799 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB2P52799 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB2P52799 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB2P52799 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
EFNB2P52799 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB2P52799 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFNB2P52799 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFNB2P52799 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFNB2P52799 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EFNB2P52799 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.19■□□□□ 0.66
EFNB2P52799 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.19■□□□□ 0.66
EFNB2P52799 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.19■□□□□ 0.66
EFNB2P52799 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFNB2P52799 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EFNB2P52799 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFNB2P52799 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFNB2P52799 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.19■□□□□ 0.66
EFNB2P52799 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EFNB2P52799 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
EFNB2P52799 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.19■□□□□ 0.66
EFNB2P52799 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFNB2P52799 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.18■□□□□ 0.66
EFNB2P52799 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFNB2P52799 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
EFNB2P52799 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFNB2P52799 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
EFNB2P52799 AC011551.1-201ENST00000614101 683 ntBASIC19.18■□□□□ 0.66
EFNB2P52799 PVT1_1.1-201ENST00000615125 194 ntBASIC19.18■□□□□ 0.66
EFNB2P52799 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFNB2P52799 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
EFNB2P52799 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.18■□□□□ 0.66
EFNB2P52799 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
EFNB2P52799 C11orf96-202ENST00000528572 1834 ntBASIC19.18■□□□□ 0.66
EFNB2P52799 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFNB2P52799 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
EFNB2P52799 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB2P52799 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB2P52799 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB2P52799 YBX1P4-201ENST00000392794 808 ntBASIC19.17■□□□□ 0.66
EFNB2P52799 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB2P52799 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.17■□□□□ 0.66
EFNB2P52799 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB2P52799 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB2P52799 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB2P52799 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
EFNB2P52799 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
EFNB2P52799 AC080038.3-201ENST00000623346 1952 ntBASIC19.17■□□□□ 0.66
EFNB2P52799 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.17■□□□□ 0.66
EFNB2P52799 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
EFNB2P52799 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
EFNB2P52799 AC092053.2-201ENST00000640557 1818 ntBASIC19.16■□□□□ 0.66
EFNB2P52799 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFNB2P52799 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.16■□□□□ 0.66
EFNB2P52799 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFNB2P52799 AC103834.1-201ENST00000520383 144 ntBASIC19.16■□□□□ 0.66
EFNB2P52799 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.16■□□□□ 0.66
EFNB2P52799 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFNB2P52799 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFNB2P52799 AL353803.4-201ENST00000565882 1934 ntBASIC19.15■□□□□ 0.66
EFNB2P52799 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
EFNB2P52799 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB2P52799 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB2P52799 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB2P52799 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.15■□□□□ 0.66
EFNB2P52799 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.15■□□□□ 0.66
EFNB2P52799 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB2P52799 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB2P52799 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
EFNB2P52799 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB2P52799 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB2P52799 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB2P52799 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.15■□□□□ 0.66
EFNB2P52799 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB2P52799 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB2P52799 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.15■□□□□ 0.66
EFNB2P52799 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
EFNB2P52799 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.14■□□□□ 0.65
EFNB2P52799 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.14■□□□□ 0.65
EFNB2P52799 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EFNB2P52799 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.14■□□□□ 0.65
EFNB2P52799 MIR4508-201ENST00000584178 70 ntBASIC19.14■□□□□ 0.65
EFNB2P52799 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.14■□□□□ 0.65
EFNB2P52799 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
EFNB2P52799 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EFNB2P52799 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
EFNB2P52799 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
EFNB2P52799 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EFNB2P52799 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
EFNB2P52799 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.13■□□□□ 0.65
EFNB2P52799 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.13■□□□□ 0.65
EFNB2P52799 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EFNB2P52799 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.13■□□□□ 0.65
EFNB2P52799 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.13■□□□□ 0.65
EFNB2P52799 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.13■□□□□ 0.65
EFNB2P52799 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.13■□□□□ 0.65
EFNB2P52799 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
EFNB2P52799 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.13■□□□□ 0.65
EFNB2P52799 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
EFNB2P52799 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms