Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 MIR6724-2-201ENST00000616483 92 ntBASIC21.43■■□□□ 1.02
CLCN2P51788 MIR6722-201ENST00000617286 78 ntBASIC21.43■■□□□ 1.02
CLCN2P51788 MIR6724-4-201ENST00000617390 92 ntBASIC21.43■■□□□ 1.02
CLCN2P51788 MIR6724-3-201ENST00000622482 92 ntBASIC21.43■■□□□ 1.02
CLCN2P51788 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.43■■□□□ 1.02
CLCN2P51788 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.43■■□□□ 1.02
CLCN2P51788 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN2P51788 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN2P51788 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.43■■□□□ 1.02
CLCN2P51788 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN2P51788 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN2P51788 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN2P51788 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CLCN2P51788 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN2P51788 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CLCN2P51788 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN2P51788 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN2P51788 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CLCN2P51788 AL161729.1-201ENST00000604104 1402 ntBASIC21.42■■□□□ 1.02
CLCN2P51788 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN2P51788 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.42■■□□□ 1.02
CLCN2P51788 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CLCN2P51788 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN2P51788 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.41■■□□□ 1.02
CLCN2P51788 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCN2P51788 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN2P51788 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCN2P51788 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN2P51788 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN2P51788 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCN2P51788 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CLCN2P51788 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN2P51788 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCN2P51788 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN2P51788 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN2P51788 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CLCN2P51788 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN2P51788 AL022069.1-201ENST00000568025 1636 ntBASIC21.4■■□□□ 1.02
CLCN2P51788 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN2P51788 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN2P51788 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.4■■□□□ 1.02
CLCN2P51788 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN2P51788 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN2P51788 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN2P51788 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.4■■□□□ 1.02
CLCN2P51788 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN2P51788 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.4■■□□□ 1.02
CLCN2P51788 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN2P51788 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.4■■□□□ 1.02
CLCN2P51788 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.4■■□□□ 1.02
CLCN2P51788 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN2P51788 AC131274.2-201ENST00000580697 1507 ntBASIC21.39■■□□□ 1.02
CLCN2P51788 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.39■■□□□ 1.02
CLCN2P51788 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CLCN2P51788 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.39■■□□□ 1.01
CLCN2P51788 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN2P51788 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN2P51788 AC092068.2-201ENST00000590491 1708 ntBASIC21.39■■□□□ 1.01
CLCN2P51788 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.39■■□□□ 1.01
CLCN2P51788 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.39■■□□□ 1.01
CLCN2P51788 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.39■■□□□ 1.01
CLCN2P51788 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN2P51788 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN2P51788 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.39■■□□□ 1.01
CLCN2P51788 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.39■■□□□ 1.01
CLCN2P51788 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN2P51788 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN2P51788 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN2P51788 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.38■■□□□ 1.01
CLCN2P51788 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN2P51788 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
CLCN2P51788 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.38■■□□□ 1.01
CLCN2P51788 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.38■■□□□ 1.01
CLCN2P51788 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN2P51788 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.38■■□□□ 1.01
CLCN2P51788 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN2P51788 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN2P51788 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.38■■□□□ 1.01
CLCN2P51788 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CLCN2P51788 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.37■■□□□ 1.01
CLCN2P51788 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.37■■□□□ 1.01
CLCN2P51788 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.37■■□□□ 1.01
CLCN2P51788 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.37■■□□□ 1.01
CLCN2P51788 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.37■■□□□ 1.01
CLCN2P51788 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.37■■□□□ 1.01
CLCN2P51788 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN2P51788 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CLCN2P51788 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN2P51788 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN2P51788 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.36■■□□□ 1.01
CLCN2P51788 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN2P51788 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN2P51788 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN2P51788 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN2P51788 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN2P51788 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.36■■□□□ 1.01
CLCN2P51788 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN2P51788 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCN2P51788 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
CLCN2P51788 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms