Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HTR3AP46098 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HTR3AP46098 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
HTR3AP46098 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HTR3AP46098 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HTR3AP46098 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HTR3AP46098 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HTR3AP46098 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HTR3AP46098 KRT16P3-201ENST00000439127 1283 ntBASIC20.44■□□□□ 0.86
HTR3AP46098 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HTR3AP46098 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HTR3AP46098 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HTR3AP46098 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HTR3AP46098 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HTR3AP46098 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HTR3AP46098 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
HTR3AP46098 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HTR3AP46098 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HTR3AP46098 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.43■□□□□ 0.86
HTR3AP46098 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.43■□□□□ 0.86
HTR3AP46098 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.43■□□□□ 0.86
HTR3AP46098 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HTR3AP46098 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HTR3AP46098 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
HTR3AP46098 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.43■□□□□ 0.86
HTR3AP46098 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
HTR3AP46098 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HTR3AP46098 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HTR3AP46098 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.43■□□□□ 0.86
HTR3AP46098 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.43■□□□□ 0.86
HTR3AP46098 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HTR3AP46098 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HTR3AP46098 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.42■□□□□ 0.86
HTR3AP46098 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HTR3AP46098 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.42■□□□□ 0.86
HTR3AP46098 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HTR3AP46098 AC233723.2-201ENST00000623798 2106 ntBASIC20.42■□□□□ 0.86
HTR3AP46098 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HTR3AP46098 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
HTR3AP46098 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HTR3AP46098 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HTR3AP46098 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HTR3AP46098 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HTR3AP46098 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.41■□□□□ 0.86
HTR3AP46098 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HTR3AP46098 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HTR3AP46098 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.41■□□□□ 0.86
HTR3AP46098 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HTR3AP46098 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.41■□□□□ 0.86
HTR3AP46098 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HTR3AP46098 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.4■□□□□ 0.86
HTR3AP46098 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HTR3AP46098 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HTR3AP46098 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.4■□□□□ 0.86
HTR3AP46098 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HTR3AP46098 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HTR3AP46098 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
HTR3AP46098 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HTR3AP46098 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.4■□□□□ 0.86
HTR3AP46098 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HTR3AP46098 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.4■□□□□ 0.86
HTR3AP46098 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HTR3AP46098 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.4■□□□□ 0.86
HTR3AP46098 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.4■□□□□ 0.86
HTR3AP46098 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HTR3AP46098 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
HTR3AP46098 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HTR3AP46098 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.39■□□□□ 0.85
HTR3AP46098 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HTR3AP46098 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.39■□□□□ 0.85
HTR3AP46098 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.39■□□□□ 0.85
HTR3AP46098 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.39■□□□□ 0.85
HTR3AP46098 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HTR3AP46098 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HTR3AP46098 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HTR3AP46098 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HTR3AP46098 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HTR3AP46098 AC137767.1-201ENST00000602918 1920 ntBASIC20.38■□□□□ 0.85
HTR3AP46098 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.38■□□□□ 0.85
HTR3AP46098 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HTR3AP46098 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HTR3AP46098 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR3AP46098 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.37■□□□□ 0.85
HTR3AP46098 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
HTR3AP46098 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HTR3AP46098 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR3AP46098 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR3AP46098 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
HTR3AP46098 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR3AP46098 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR3AP46098 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR3AP46098 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HTR3AP46098 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR3AP46098 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR3AP46098 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR3AP46098 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR3AP46098 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HTR3AP46098 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HTR3AP46098 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
HTR3AP46098 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms