Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.17■□□□□ 0.98
SSR2P43308 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.17■□□□□ 0.98
SSR2P43308 AL512631.2-201ENST00000604634 923 ntBASIC21.17■□□□□ 0.98
SSR2P43308 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.17■□□□□ 0.98
SSR2P43308 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSR2P43308 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SSR2P43308 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SSR2P43308 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
SSR2P43308 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSR2P43308 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.17■□□□□ 0.98
SSR2P43308 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SSR2P43308 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSR2P43308 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSR2P43308 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSR2P43308 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSR2P43308 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSR2P43308 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.16■□□□□ 0.98
SSR2P43308 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.16■□□□□ 0.98
SSR2P43308 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSR2P43308 SRD5A1P1-201ENST00000442297 786 ntBASIC21.16■□□□□ 0.98
SSR2P43308 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.16■□□□□ 0.98
SSR2P43308 AC131212.1-201ENST00000613771 668 ntBASIC21.16■□□□□ 0.98
SSR2P43308 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SSR2P43308 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR2P43308 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR2P43308 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.15■□□□□ 0.98
SSR2P43308 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SSR2P43308 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.15■□□□□ 0.98
SSR2P43308 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SSR2P43308 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.15■□□□□ 0.98
SSR2P43308 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR2P43308 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSR2P43308 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSR2P43308 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSR2P43308 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSR2P43308 AC241377.3-202ENST00000626088 1088 ntBASIC21.15■□□□□ 0.98
SSR2P43308 AC241585.3-202ENST00000628937 1088 ntBASIC21.15■□□□□ 0.98
SSR2P43308 AC245100.8-202ENST00000629247 1058 ntBASIC21.15■□□□□ 0.98
SSR2P43308 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR2P43308 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
SSR2P43308 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR2P43308 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.15■□□□□ 0.98
SSR2P43308 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR2P43308 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.15■□□□□ 0.98
SSR2P43308 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SSR2P43308 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSR2P43308 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSR2P43308 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SSR2P43308 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SSR2P43308 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SSR2P43308 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSR2P43308 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SSR2P43308 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.14■□□□□ 0.97
SSR2P43308 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.14■□□□□ 0.97
SSR2P43308 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.14■□□□□ 0.97
SSR2P43308 AC009086.3-201ENST00000623486 1008 ntBASIC21.14■□□□□ 0.97
SSR2P43308 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSR2P43308 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SSR2P43308 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.14■□□□□ 0.97
SSR2P43308 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSR2P43308 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSR2P43308 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSR2P43308 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SSR2P43308 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.13■□□□□ 0.97
SSR2P43308 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.13■□□□□ 0.97
SSR2P43308 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SSR2P43308 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.13■□□□□ 0.97
SSR2P43308 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SSR2P43308 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSR2P43308 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.13■□□□□ 0.97
SSR2P43308 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.12■□□□□ 0.97
SSR2P43308 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSR2P43308 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
SSR2P43308 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
SSR2P43308 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSR2P43308 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.12■□□□□ 0.97
SSR2P43308 AC131281.2-201ENST00000520478 145 ntBASIC21.12■□□□□ 0.97
SSR2P43308 AC133561.1-201ENST00000568600 2415 ntBASIC21.12■□□□□ 0.97
SSR2P43308 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR2P43308 AC099791.2-201ENST00000605725 427 ntBASIC21.11■□□□□ 0.97
SSR2P43308 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.11■□□□□ 0.97
SSR2P43308 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR2P43308 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.11■□□□□ 0.97
SSR2P43308 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSR2P43308 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR2P43308 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSR2P43308 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
SSR2P43308 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR2P43308 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSR2P43308 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSR2P43308 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR2P43308 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SSR2P43308 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SSR2P43308 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SSR2P43308 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.1■□□□□ 0.97
SSR2P43308 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSR2P43308 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.1■□□□□ 0.97
SSR2P43308 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.1■□□□□ 0.97
SSR2P43308 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR2P43308 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms