Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 tK(CUU)PtK(CUU)P 73 nt4.33□□□□□ -1.72
RPH1P39956 ARC1YGL105W 1131 nt4.33□□□□□ -1.72
RPH1P39956 ARC19YKL013C 516 nt4.33□□□□□ -1.72
RPH1P39956 YKR104WYKR104W 921 nt4.33□□□□□ -1.72
RPH1P39956 YLL047WYLL047W 384 nt4.33□□□□□ -1.72
RPH1P39956 YLR198CYLR198C 360 nt4.33□□□□□ -1.72
RPH1P39956 YBL010CYBL010C 843 nt4.33□□□□□ -1.72
RPH1P39956 YML119WYML119W 1074 nt4.33□□□□□ -1.72
RPH1P39956 YBL107W-AYBL107W-A 105 nt4.33□□□□□ -1.72
RPH1P39956 RMI1YPL024W 726 nt4.33□□□□□ -1.72
RPH1P39956 YPL168WYPL168W 1293 nt4.33□□□□□ -1.72
RPH1P39956 PEP5YMR231W 3090 nt4.33□□□□□ -1.72
RPH1P39956 SBE2YDR351W 2595 nt4.33□□□□□ -1.72
RPH1P39956 LYP1YNL268W 1836 nt4.32□□□□□ -1.72
RPH1P39956 UPC2YDR213W 2742 nt4.32□□□□□ -1.72
RPH1P39956 TDA11YHR159W 1515 nt4.32□□□□□ -1.72
RPH1P39956 ZPR1YGR211W 1461 nt4.32□□□□□ -1.72
RPH1P39956 YDL026WYDL026W 312 nt4.32□□□□□ -1.72
RPH1P39956 NUP42YDR192C 1293 nt4.32□□□□□ -1.72
RPH1P39956 YJL218WYJL218W 591 nt4.32□□□□□ -1.72
RPH1P39956 MRT4YKL009W 711 nt4.32□□□□□ -1.72
RPH1P39956 YLR125WYLR125W 411 nt4.32□□□□□ -1.72
RPH1P39956 YLR225CYLR225C 1224 nt4.32□□□□□ -1.72
RPH1P39956 YOR379CYOR379C 339 nt4.32□□□□□ -1.72
RPH1P39956 ANT1YPR128C 987 nt4.32□□□□□ -1.72
RPH1P39956 HUL4YJR036C 2679 nt4.32□□□□□ -1.72
RPH1P39956 SUL2YLR092W 2682 nt4.32□□□□□ -1.72
RPH1P39956 CAB3YKL088W 1716 nt4.32□□□□□ -1.72
RPH1P39956 IZH3YLR023C 1632 nt4.32□□□□□ -1.72
RPH1P39956 YHL012WYHL012W 1482 nt4.31□□□□□ -1.72
RPH1P39956 YDL183CYDL183C 963 nt4.31□□□□□ -1.72
RPH1P39956 YFT2YDR319C 825 nt4.31□□□□□ -1.72
RPH1P39956 YDR336WYDR336W 945 nt4.31□□□□□ -1.72
RPH1P39956 CAF16YFL028C 870 nt4.31□□□□□ -1.72
RPH1P39956 IRC6YFR043C 714 nt4.31□□□□□ -1.72
RPH1P39956 GRE3YHR104W 984 nt4.31□□□□□ -1.72
RPH1P39956 DAN1YJR150C 897 nt4.31□□□□□ -1.72
RPH1P39956 TVP38YKR088C 1014 nt4.31□□□□□ -1.72
RPH1P39956 SNO1YMR095C 675 nt4.31□□□□□ -1.72
RPH1P39956 CTL1YMR180C 963 nt4.31□□□□□ -1.72
RPH1P39956 YMR315WYMR315W 1050 nt4.31□□□□□ -1.72
RPH1P39956 DIA1YMR316W 1011 nt4.31□□□□□ -1.72
RPH1P39956 GDH2YDL215C 3279 nt4.31□□□□□ -1.72
RPH1P39956 YPS7YDR349C 1791 nt4.3□□□□□ -1.72
RPH1P39956 DEG1YFL001W 1329 nt4.3□□□□□ -1.72
RPH1P39956 YIL028WYIL028W 399 nt4.3□□□□□ -1.72
RPH1P39956 FMP46YKR049C 402 nt4.3□□□□□ -1.72
RPH1P39956 NKP2YLR315W 462 nt4.3□□□□□ -1.72
RPH1P39956 YLR326WYLR326W 723 nt4.3□□□□□ -1.72
RPH1P39956 RSF1YMR030W 1131 nt4.3□□□□□ -1.72
RPH1P39956 SPO19YPL130W 672 nt4.3□□□□□ -1.72
RPH1P39956 TGL1YKL140W 1647 nt4.3□□□□□ -1.72
RPH1P39956 SWC3YAL011W 1878 nt4.3□□□□□ -1.72
RPH1P39956 YMR221CYMR221C 1515 nt4.3□□□□□ -1.72
RPH1P39956 AZR1YGR224W 1842 nt4.3□□□□□ -1.72
RPH1P39956 AVT1YJR001W 1809 nt4.3□□□□□ -1.72
RPH1P39956 IXR1YKL032C 1794 nt4.3□□□□□ -1.72
RPH1P39956 CBP1YJL209W 1965 nt4.29□□□□□ -1.72
RPH1P39956 KCC4YCL024W 3114 nt4.29□□□□□ -1.72
RPH1P39956 MUP3YHL036W 1641 nt4.29□□□□□ -1.72
RPH1P39956 CUS1YMR240C 1311 nt4.29□□□□□ -1.72
RPH1P39956 KAR1YNL188W 1302 nt4.29□□□□□ -1.72
RPH1P39956 FRT2YAL028W 1587 nt4.29□□□□□ -1.72
RPH1P39956 snR7-SsnR7-S 179 nt4.29□□□□□ -1.72
RPH1P39956 YDR282CYDR282C 1245 nt4.29□□□□□ -1.72
RPH1P39956 BNA6YFR047C 888 nt4.29□□□□□ -1.72
RPH1P39956 YIL021C-AYIL021C-A 270 nt4.29□□□□□ -1.72
RPH1P39956 COX3Q0275 810 nt4.29□□□□□ -1.72
RPH1P39956 YAL016C-BYAL016C-B 186 nt4.29□□□□□ -1.72
RPH1P39956 NTR2YKR022C 969 nt4.29□□□□□ -1.72
RPH1P39956 SPO20YMR017W 1194 nt4.29□□□□□ -1.72
RPH1P39956 MTG1YMR097C 1104 nt4.29□□□□□ -1.72
RPH1P39956 CUZ1YNL155W 825 nt4.29□□□□□ -1.72
RPH1P39956 YNL181WYNL181W 1224 nt4.29□□□□□ -1.72
RPH1P39956 LTO1YNL260C 597 nt4.29□□□□□ -1.72
RPH1P39956 YPR015CYPR015C 744 nt4.29□□□□□ -1.72
RPH1P39956 GCR1YPL075W 2358 nt4.29□□□□□ -1.72
RPH1P39956 TRE1YPL176C 2352 nt4.29□□□□□ -1.72
RPH1P39956 IFM1YOL023W 2031 nt4.28□□□□□ -1.72
RPH1P39956 HOYDL227C 1761 nt4.28□□□□□ -1.72
RPH1P39956 FRA2YGL220W 363 nt4.28□□□□□ -1.72
RPH1P39956 FSH1YHR049W 732 nt4.28□□□□□ -1.72
RPH1P39956 YHR137C-AYHR137C-A 651 nt4.28□□□□□ -1.72
RPH1P39956 CNB1YKL190W 528 nt4.28□□□□□ -1.72
RPH1P39956 PSY3YLR376C 729 nt4.28□□□□□ -1.72
RPH1P39956 NUP2YLR335W 2163 nt4.28□□□□□ -1.72
RPH1P39956 PAH1YMR165C 2589 nt4.28□□□□□ -1.72
RPH1P39956 PHM7YOL084W 2976 nt4.28□□□□□ -1.72
RPH1P39956 SMP1YBR182C 1359 nt4.27□□□□□ -1.73
RPH1P39956 RPN6YDL097C 1305 nt4.27□□□□□ -1.73
RPH1P39956 RPS11AYDR025W 471 nt4.27□□□□□ -1.73
RPH1P39956 KRE28YDR532C 1158 nt4.27□□□□□ -1.73
RPH1P39956 CIR1YGR207C 786 nt4.27□□□□□ -1.73
RPH1P39956 NEJ1YLR265C 1029 nt4.27□□□□□ -1.73
RPH1P39956 YIP3YNL044W 531 nt4.27□□□□□ -1.73
RPH1P39956 YNL319WYNL319W 441 nt4.27□□□□□ -1.73
RPH1P39956 ATG19YOL082W 1248 nt4.27□□□□□ -1.73
RPH1P39956 VPS68YOL129W 555 nt4.27□□□□□ -1.73
RPH1P39956 PDX3YBR035C 687 nt4.27□□□□□ -1.73
RPH1P39956 NRG2YBR066C 663 nt4.27□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 85.4 ms