Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARSP26640 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VARSP26640 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
VARSP26640 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARSP26640 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.75■■□□□ 1.07
VARSP26640 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARSP26640 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.75■■□□□ 1.07
VARSP26640 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.75■■□□□ 1.07
VARSP26640 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARSP26640 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.75■■□□□ 1.07
VARSP26640 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARSP26640 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARSP26640 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARSP26640 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VARSP26640 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VARSP26640 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.74■■□□□ 1.07
VARSP26640 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VARSP26640 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VARSP26640 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.74■■□□□ 1.07
VARSP26640 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.74■■□□□ 1.07
VARSP26640 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VARSP26640 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VARSP26640 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VARSP26640 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VARSP26640 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VARSP26640 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
VARSP26640 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VARSP26640 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VARSP26640 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
VARSP26640 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
VARSP26640 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VARSP26640 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
VARSP26640 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VARSP26640 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VARSP26640 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.72■■□□□ 1.07
VARSP26640 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.72■■□□□ 1.07
VARSP26640 AL356740.2-201ENST00000601559 647 ntBASIC21.72■■□□□ 1.07
VARSP26640 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VARSP26640 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VARSP26640 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VARSP26640 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VARSP26640 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VARSP26640 AC079630.1-202ENST00000618127 1840 ntBASIC21.71■■□□□ 1.07
VARSP26640 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VARSP26640 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
VARSP26640 AL117328.2-201ENST00000624617 1940 ntBASIC21.71■■□□□ 1.07
VARSP26640 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VARSP26640 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VARSP26640 AL136116.3-201ENST00000402907 1138 ntBASIC21.71■■□□□ 1.07
VARSP26640 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.71■■□□□ 1.07
VARSP26640 AC131281.2-201ENST00000520478 145 ntBASIC21.71■■□□□ 1.07
VARSP26640 MIR6724-1-201ENST00000616420 92 ntBASIC21.71■■□□□ 1.07
VARSP26640 MIR6724-2-201ENST00000616483 92 ntBASIC21.71■■□□□ 1.07
VARSP26640 MIR6724-4-201ENST00000617390 92 ntBASIC21.71■■□□□ 1.07
VARSP26640 MIR6724-3-201ENST00000622482 92 ntBASIC21.71■■□□□ 1.07
VARSP26640 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VARSP26640 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VARSP26640 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VARSP26640 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
VARSP26640 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VARSP26640 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.71■■□□□ 1.07
VARSP26640 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
VARSP26640 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.71■■□□□ 1.07
VARSP26640 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.7■■□□□ 1.07
VARSP26640 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VARSP26640 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VARSP26640 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.7■■□□□ 1.06
VARSP26640 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.7■■□□□ 1.06
VARSP26640 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
VARSP26640 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.7■■□□□ 1.06
VARSP26640 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
VARSP26640 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VARSP26640 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VARSP26640 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
VARSP26640 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.69■■□□□ 1.06
VARSP26640 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VARSP26640 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VARSP26640 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.69■■□□□ 1.06
VARSP26640 AC233723.2-201ENST00000623798 2106 ntBASIC21.69■■□□□ 1.06
VARSP26640 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
VARSP26640 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VARSP26640 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VARSP26640 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.69■■□□□ 1.06
VARSP26640 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VARSP26640 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VARSP26640 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.69■■□□□ 1.06
VARSP26640 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.69■■□□□ 1.06
VARSP26640 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VARSP26640 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.68■■□□□ 1.06
VARSP26640 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
VARSP26640 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VARSP26640 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.68■■□□□ 1.06
VARSP26640 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VARSP26640 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.68■■□□□ 1.06
VARSP26640 AC133561.4-201ENST00000566112 224 ntBASIC21.68■■□□□ 1.06
VARSP26640 MIR3621-201ENST00000580529 85 ntBASIC21.68■■□□□ 1.06
VARSP26640 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VARSP26640 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
VARSP26640 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VARSP26640 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms