Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL1P22362 AC139530.1-201ENST00000575312 1977 ntBASIC19.19■□□□□ 0.66
CCL1P22362 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.19■□□□□ 0.66
CCL1P22362 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.19■□□□□ 0.66
CCL1P22362 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.19■□□□□ 0.66
CCL1P22362 DUX4L4-201ENST00000566884 1269 ntBASIC19.19■□□□□ 0.66
CCL1P22362 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.19■□□□□ 0.66
CCL1P22362 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL1P22362 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.19■□□□□ 0.66
CCL1P22362 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCL1P22362 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL1P22362 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL1P22362 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL1P22362 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL1P22362 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL1P22362 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL1P22362 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL1P22362 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCL1P22362 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL1P22362 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCL1P22362 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.18■□□□□ 0.66
CCL1P22362 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCL1P22362 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL1P22362 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCL1P22362 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL1P22362 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL1P22362 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.18■□□□□ 0.66
CCL1P22362 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL1P22362 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL1P22362 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL1P22362 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CCL1P22362 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL1P22362 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCL1P22362 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL1P22362 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCL1P22362 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL1P22362 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL1P22362 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCL1P22362 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.17■□□□□ 0.66
CCL1P22362 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCL1P22362 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
CCL1P22362 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL1P22362 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL1P22362 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL1P22362 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCL1P22362 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCL1P22362 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL1P22362 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCL1P22362 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL1P22362 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.16■□□□□ 0.66
CCL1P22362 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.16■□□□□ 0.66
CCL1P22362 AC009086.3-201ENST00000623486 1008 ntBASIC19.16■□□□□ 0.66
CCL1P22362 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCL1P22362 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CCL1P22362 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCL1P22362 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCL1P22362 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL1P22362 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL1P22362 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCL1P22362 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCL1P22362 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCL1P22362 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL1P22362 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL1P22362 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL1P22362 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL1P22362 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCL1P22362 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.15■□□□□ 0.66
CCL1P22362 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCL1P22362 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL1P22362 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL1P22362 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.15■□□□□ 0.66
CCL1P22362 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCL1P22362 KRT125P-201ENST00000546827 989 ntBASIC19.15■□□□□ 0.66
CCL1P22362 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCL1P22362 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL1P22362 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL1P22362 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL1P22362 AC137767.1-201ENST00000602918 1920 ntBASIC19.15■□□□□ 0.66
CCL1P22362 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCL1P22362 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCL1P22362 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCL1P22362 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCL1P22362 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL1P22362 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CCL1P22362 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL1P22362 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL1P22362 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL1P22362 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCL1P22362 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCL1P22362 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.14■□□□□ 0.65
CCL1P22362 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCL1P22362 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.14■□□□□ 0.65
CCL1P22362 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL1P22362 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.14■□□□□ 0.65
CCL1P22362 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCL1P22362 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCL1P22362 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCL1P22362 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL1P22362 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCL1P22362 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms