Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST1H1DP16402 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
HIST1H1DP16402 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.86■□□□□ 0.61
HIST1H1DP16402 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1DP16402 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1DP16402 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1DP16402 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1DP16402 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1DP16402 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1DP16402 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1DP16402 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1DP16402 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HIST1H1DP16402 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H1DP16402 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H1DP16402 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H1DP16402 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H1DP16402 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.85■□□□□ 0.61
HIST1H1DP16402 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H1DP16402 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HIST1H1DP16402 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
HIST1H1DP16402 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HIST1H1DP16402 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H1DP16402 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H1DP16402 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.85■□□□□ 0.61
HIST1H1DP16402 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H1DP16402 AC080038.3-201ENST00000623346 1952 ntBASIC18.84■□□□□ 0.61
HIST1H1DP16402 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
HIST1H1DP16402 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H1DP16402 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.84■□□□□ 0.61
HIST1H1DP16402 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H1DP16402 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H1DP16402 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
HIST1H1DP16402 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.84■□□□□ 0.61
HIST1H1DP16402 MIR4281-201ENST00000580852 62 ntBASIC18.84■□□□□ 0.61
HIST1H1DP16402 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.84■□□□□ 0.61
HIST1H1DP16402 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.84■□□□□ 0.61
HIST1H1DP16402 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
HIST1H1DP16402 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H1DP16402 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.84■□□□□ 0.61
HIST1H1DP16402 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.84■□□□□ 0.61
HIST1H1DP16402 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H1DP16402 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H1DP16402 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.83■□□□□ 0.61
HIST1H1DP16402 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.83■□□□□ 0.61
HIST1H1DP16402 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H1DP16402 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
HIST1H1DP16402 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H1DP16402 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.83■□□□□ 0.6
HIST1H1DP16402 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.83■□□□□ 0.6
HIST1H1DP16402 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.83■□□□□ 0.6
HIST1H1DP16402 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H1DP16402 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H1DP16402 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H1DP16402 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H1DP16402 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H1DP16402 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H1DP16402 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H1DP16402 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H1DP16402 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HIST1H1DP16402 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H1DP16402 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H1DP16402 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H1DP16402 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.82■□□□□ 0.6
HIST1H1DP16402 THA1P-201ENST00000590384 1145 ntBASIC18.82■□□□□ 0.6
HIST1H1DP16402 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H1DP16402 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H1DP16402 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H1DP16402 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H1DP16402 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.81■□□□□ 0.6
HIST1H1DP16402 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H1DP16402 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H1DP16402 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H1DP16402 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H1DP16402 AC087742.1-201ENST00000575880 1738 ntBASIC18.81■□□□□ 0.6
HIST1H1DP16402 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H1DP16402 KRT18P24-201ENST00000344739 1156 ntBASIC18.81■□□□□ 0.6
HIST1H1DP16402 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H1DP16402 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H1DP16402 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.81■□□□□ 0.6
HIST1H1DP16402 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HIST1H1DP16402 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HIST1H1DP16402 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H1DP16402 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H1DP16402 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HIST1H1DP16402 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H1DP16402 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HIST1H1DP16402 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H1DP16402 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H1DP16402 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HIST1H1DP16402 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H1DP16402 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H1DP16402 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H1DP16402 AC144652.1-201ENST00000609974 1624 ntBASIC18.79■□□□□ 0.6
HIST1H1DP16402 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HIST1H1DP16402 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H1DP16402 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.79■□□□□ 0.6
HIST1H1DP16402 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H1DP16402 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H1DP16402 DUX4L18-201ENST00000553347 1267 ntBASIC18.79■□□□□ 0.6
HIST1H1DP16402 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms