Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TIMP2P16035 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.28■■□□□ 1.16
TIMP2P16035 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
TIMP2P16035 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TIMP2P16035 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TIMP2P16035 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
TIMP2P16035 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.27■■□□□ 1.16
TIMP2P16035 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TIMP2P16035 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TIMP2P16035 AC105265.2-201ENST00000467189 838 ntBASIC22.27■■□□□ 1.16
TIMP2P16035 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TIMP2P16035 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.27■■□□□ 1.16
TIMP2P16035 AC010525.1-201ENST00000585559 441 ntBASIC22.27■■□□□ 1.16
TIMP2P16035 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TIMP2P16035 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.27■■□□□ 1.16
TIMP2P16035 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TIMP2P16035 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.26■■□□□ 1.15
TIMP2P16035 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TIMP2P16035 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
TIMP2P16035 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
TIMP2P16035 AC092068.2-201ENST00000590491 1708 ntBASIC22.26■■□□□ 1.15
TIMP2P16035 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TIMP2P16035 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
TIMP2P16035 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.26■■□□□ 1.15
TIMP2P16035 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.26■■□□□ 1.15
TIMP2P16035 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TIMP2P16035 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
TIMP2P16035 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TIMP2P16035 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TIMP2P16035 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TIMP2P16035 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.26■■□□□ 1.15
TIMP2P16035 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.25■■□□□ 1.15
TIMP2P16035 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
TIMP2P16035 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TIMP2P16035 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TIMP2P16035 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TIMP2P16035 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TIMP2P16035 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
TIMP2P16035 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TIMP2P16035 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TIMP2P16035 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TIMP2P16035 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TIMP2P16035 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
TIMP2P16035 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.25■■□□□ 1.15
TIMP2P16035 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TIMP2P16035 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TIMP2P16035 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TIMP2P16035 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TIMP2P16035 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TIMP2P16035 MIR935-201ENST00000401179 91 ntBASIC22.24■■□□□ 1.15
TIMP2P16035 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.24■■□□□ 1.15
TIMP2P16035 OR2I1P-207ENST00000453522 948 ntBASIC22.24■■□□□ 1.15
TIMP2P16035 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.24■■□□□ 1.15
TIMP2P16035 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.24■■□□□ 1.15
TIMP2P16035 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TIMP2P16035 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.24■■□□□ 1.15
TIMP2P16035 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.23■■□□□ 1.15
TIMP2P16035 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.23■■□□□ 1.15
TIMP2P16035 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.23■■□□□ 1.15
TIMP2P16035 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.23■■□□□ 1.15
TIMP2P16035 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TIMP2P16035 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.23■■□□□ 1.15
TIMP2P16035 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TIMP2P16035 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TIMP2P16035 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TIMP2P16035 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.23■■□□□ 1.15
TIMP2P16035 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.22■■□□□ 1.15
TIMP2P16035 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TIMP2P16035 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.22■■□□□ 1.15
TIMP2P16035 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
TIMP2P16035 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TIMP2P16035 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TIMP2P16035 AC004687.1-201ENST00000579003 1625 ntBASIC22.22■■□□□ 1.15
TIMP2P16035 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.22■■□□□ 1.15
TIMP2P16035 AC126544.1-201ENST00000580842 1059 ntBASIC22.22■■□□□ 1.15
TIMP2P16035 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TIMP2P16035 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
TIMP2P16035 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TIMP2P16035 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
TIMP2P16035 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TIMP2P16035 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
TIMP2P16035 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TIMP2P16035 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TIMP2P16035 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.21■■□□□ 1.15
TIMP2P16035 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.21■■□□□ 1.15
TIMP2P16035 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
TIMP2P16035 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.21■■□□□ 1.15
TIMP2P16035 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TIMP2P16035 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TIMP2P16035 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TIMP2P16035 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TIMP2P16035 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
TIMP2P16035 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
TIMP2P16035 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
TIMP2P16035 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
TIMP2P16035 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
TIMP2P16035 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TIMP2P16035 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TIMP2P16035 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.2■■□□□ 1.14
TIMP2P16035 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms