Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBL4AP11441 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBL4AP11441 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
UBL4AP11441 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
UBL4AP11441 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBL4AP11441 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.48■□□□□ 0.87
UBL4AP11441 AL356740.2-201ENST00000601559 647 ntBASIC20.48■□□□□ 0.87
UBL4AP11441 AL117332.1-201ENST00000622628 974 ntBASIC20.48■□□□□ 0.87
UBL4AP11441 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.48■□□□□ 0.87
UBL4AP11441 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBL4AP11441 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
UBL4AP11441 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBL4AP11441 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBL4AP11441 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.47■□□□□ 0.87
UBL4AP11441 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBL4AP11441 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
UBL4AP11441 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBL4AP11441 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.47■□□□□ 0.87
UBL4AP11441 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.47■□□□□ 0.87
UBL4AP11441 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBL4AP11441 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBL4AP11441 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
UBL4AP11441 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
UBL4AP11441 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBL4AP11441 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBL4AP11441 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.46■□□□□ 0.87
UBL4AP11441 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBL4AP11441 LINC01529-204ENST00000636474 1715 ntBASIC20.46■□□□□ 0.87
UBL4AP11441 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBL4AP11441 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.46■□□□□ 0.87
UBL4AP11441 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBL4AP11441 FP325331.1-202ENST00000623531 1380 ntBASIC20.46■□□□□ 0.87
UBL4AP11441 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
UBL4AP11441 C9orf163-202ENST00000624034 2573 ntBASIC20.45■□□□□ 0.86
UBL4AP11441 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBL4AP11441 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.45■□□□□ 0.86
UBL4AP11441 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.45■□□□□ 0.86
UBL4AP11441 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.45■□□□□ 0.86
UBL4AP11441 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
UBL4AP11441 C17orf82-201ENST00000623772 1530 ntBASIC20.45■□□□□ 0.86
UBL4AP11441 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.45■□□□□ 0.86
UBL4AP11441 MIR3621-201ENST00000580529 85 ntBASIC20.45■□□□□ 0.86
UBL4AP11441 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBL4AP11441 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBL4AP11441 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBL4AP11441 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.45■□□□□ 0.86
UBL4AP11441 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBL4AP11441 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
UBL4AP11441 AC068473.5-201ENST00000616428 2072 ntBASIC20.44■□□□□ 0.86
UBL4AP11441 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBL4AP11441 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
UBL4AP11441 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBL4AP11441 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
UBL4AP11441 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBL4AP11441 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBL4AP11441 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.44■□□□□ 0.86
UBL4AP11441 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBL4AP11441 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBL4AP11441 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBL4AP11441 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
UBL4AP11441 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.43■□□□□ 0.86
UBL4AP11441 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBL4AP11441 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBL4AP11441 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.43■□□□□ 0.86
UBL4AP11441 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBL4AP11441 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBL4AP11441 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBL4AP11441 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.42■□□□□ 0.86
UBL4AP11441 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.42■□□□□ 0.86
UBL4AP11441 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBL4AP11441 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBL4AP11441 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.42■□□□□ 0.86
UBL4AP11441 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.42■□□□□ 0.86
UBL4AP11441 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBL4AP11441 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBL4AP11441 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBL4AP11441 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.41■□□□□ 0.86
UBL4AP11441 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBL4AP11441 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.41■□□□□ 0.86
UBL4AP11441 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.41■□□□□ 0.86
UBL4AP11441 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBL4AP11441 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
UBL4AP11441 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
UBL4AP11441 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBL4AP11441 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBL4AP11441 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.41■□□□□ 0.86
UBL4AP11441 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBL4AP11441 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBL4AP11441 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBL4AP11441 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.41■□□□□ 0.86
UBL4AP11441 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.41■□□□□ 0.86
UBL4AP11441 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBL4AP11441 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBL4AP11441 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBL4AP11441 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBL4AP11441 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.4■□□□□ 0.86
UBL4AP11441 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UBL4AP11441 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
UBL4AP11441 DUX4L4-201ENST00000566884 1269 ntBASIC20.4■□□□□ 0.86
UBL4AP11441 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms