Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CD48P09326 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.07■■□□□ 1.28
CD48P09326 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CD48P09326 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CD48P09326 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CD48P09326 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CD48P09326 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CD48P09326 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CD48P09326 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CD48P09326 FP325331.1-202ENST00000623531 1380 ntBASIC23.06■■□□□ 1.28
CD48P09326 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CD48P09326 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CD48P09326 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CD48P09326 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CD48P09326 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.06■■□□□ 1.28
CD48P09326 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.06■■□□□ 1.28
CD48P09326 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CD48P09326 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CD48P09326 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CD48P09326 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CD48P09326 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CD48P09326 AL117328.2-201ENST00000624617 1940 ntBASIC23.06■■□□□ 1.28
CD48P09326 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CD48P09326 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CD48P09326 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.05■■□□□ 1.28
CD48P09326 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CD48P09326 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CD48P09326 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.05■■□□□ 1.28
CD48P09326 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.05■■□□□ 1.28
CD48P09326 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CD48P09326 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
CD48P09326 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
CD48P09326 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
CD48P09326 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CD48P09326 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CD48P09326 DUX4L4-201ENST00000566884 1269 ntBASIC23.04■■□□□ 1.28
CD48P09326 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CD48P09326 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CD48P09326 EP400NL-214ENST00000641289 2402 ntBASIC23.04■■□□□ 1.28
CD48P09326 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CD48P09326 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CD48P09326 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CD48P09326 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CD48P09326 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CD48P09326 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CD48P09326 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CD48P09326 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CD48P09326 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CD48P09326 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.03■■□□□ 1.28
CD48P09326 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CD48P09326 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CD48P09326 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.03■■□□□ 1.28
CD48P09326 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CD48P09326 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CD48P09326 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CD48P09326 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CD48P09326 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CD48P09326 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CD48P09326 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CD48P09326 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
CD48P09326 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CD48P09326 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CD48P09326 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CD48P09326 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.02■■□□□ 1.28
CD48P09326 AL117332.1-201ENST00000622628 974 ntBASIC23.02■■□□□ 1.28
CD48P09326 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.02■■□□□ 1.28
CD48P09326 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CD48P09326 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.02■■□□□ 1.27
CD48P09326 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CD48P09326 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CD48P09326 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.01■■□□□ 1.27
CD48P09326 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CD48P09326 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.01■■□□□ 1.27
CD48P09326 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.01■■□□□ 1.27
CD48P09326 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CD48P09326 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.01■■□□□ 1.27
CD48P09326 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CD48P09326 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.01■■□□□ 1.27
CD48P09326 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CD48P09326 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.01■■□□□ 1.27
CD48P09326 GUSBP5-202ENST00000510805 1989 ntBASIC23.01■■□□□ 1.27
CD48P09326 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CD48P09326 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CD48P09326 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CD48P09326 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CD48P09326 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CD48P09326 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CD48P09326 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23■■□□□ 1.27
CD48P09326 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23■■□□□ 1.27
CD48P09326 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23■■□□□ 1.27
CD48P09326 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CD48P09326 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23■■□□□ 1.27
CD48P09326 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23■■□□□ 1.27
CD48P09326 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23■■□□□ 1.27
CD48P09326 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
CD48P09326 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.99■■□□□ 1.27
CD48P09326 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CD48P09326 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CD48P09326 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CD48P09326 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms